RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 RASA4BC9J798 803 aa16.26■□□□□ 0.19
CCDC28A-201ENST00000332797 RASA4O43374 803 aa16.26■□□□□ 0.19
CCDC28A-201ENST00000332797 NRDCO43847 1150 aa16.26■□□□□ 0.19
CCDC28A-201ENST00000332797 CD48P09326 243 aa16.26■□□□□ 0.19
CCDC28A-201ENST00000332797 NDUFV2P19404 249 aa16.26■□□□□ 0.19
CCDC28A-201ENST00000332797 KIF5AQ12840 1032 aa16.26■□□□□ 0.19
CCDC28A-201ENST00000332797 MMRN1Q13201 1228 aa16.26■□□□□ 0.19
CCDC28A-201ENST00000332797 GSE1Q14687 1217 aa16.26■□□□□ 0.19
CCDC28A-201ENST00000332797 HNRNPA1L2Q32P51 320 aaKnown RBP16.26■□□□□ 0.19
CCDC28A-201ENST00000332797 ACCSLQ4AC99 568 aa16.26■□□□□ 0.19
CCDC28A-201ENST00000332797 CACUL1Q86Y37 369 aa16.26■□□□□ 0.19
CCDC28A-201ENST00000332797 UMODL1-AS1Q8N2C9 162 aa16.26■□□□□ 0.19
CCDC28A-201ENST00000332797 SH2D3CQ8N5H7 860 aa16.26■□□□□ 0.19
CCDC28A-201ENST00000332797 ZBTB44Q8NCP5 570 aa16.26■□□□□ 0.19
CCDC28A-201ENST00000332797 TPCN2Q8NHX9 752 aa16.26■□□□□ 0.19
CCDC28A-201ENST00000332797 TSC1Q92574 1164 aa16.26■□□□□ 0.19
CCDC28A-201ENST00000332797 HMCESQ96FZ2 354 aa16.26■□□□□ 0.19
CCDC28A-201ENST00000332797 CELF6Q96J87 481 aaKnown RBP16.26■□□□□ 0.19
CCDC28A-201ENST00000332797 CALN1Q9BXU9 219 aa16.26■□□□□ 0.19
CCDC28A-201ENST00000332797 ACE2Q9BYF1 805 aaPredicted RBP16.26■□□□□ 0.19
CCDC28A-201ENST00000332797 CKAP5Q14008 2032 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 CCDC163A0A0D9SF12 145 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 EDDM13A0A1B0GTR0 161 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 ZMPSTE24O75844 475 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 MT-CO1P00395 513 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 SRCP12931 536 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 AMPD1P23109 780 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 ARSEP51690 589 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 CCZ1BP86790 482 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 CCZ1P86791 482 aaPredicted RBP16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 CAMK2GQ13555 558 aaPredicted RBP16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 DPYSL3Q14195 570 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 PDK2Q15119 407 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 PARP15Q460N3 678 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 RETSATQ6NUM9 610 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 C11orf63Q6NUN7 778 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 KIAA1324Q6UXG2 1013 aaKnown RBP16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 DAAM2Q86T65 1068 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 ATP11CQ8NB49 1132 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 OR2T3Q8NH03 318 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 CALR3Q96L12 384 aaKnown RBP16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 PRSS16Q9NQE7 514 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 RCOR3Q9P2K3 495 aaPredicted RBP16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 TRIM10Q9UDY6 481 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 HPCAL4Q9UM19 191 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 HS3ST2Q9Y278 367 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 MFHAS1Q9Y4C4 1052 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 ARIH1Q9Y4X5 557 aaPredicted RBP16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 ADGRG1Q9Y653 693 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 ALG6Q9Y672 507 aa16.25■□□□□ 0.19
CCDC28A-201ENST00000332797 MACROD2A1Z1Q3 448 aa16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 K7ERQ8 282 aa16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 ATP9BO43861 1147 aa16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 SIN3BO75182 1162 aa16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 KRT1P04264 644 aa16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 VAV1P15498 845 aa16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 VASPP50552 380 aaPredicted RBP16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 NDST2P52849 883 aa16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 COPAP53621 1224 aa16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 YBEYP58557 167 aaPredicted RBP16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 ARF5P84085 180 aa16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 NHLH1Q02575 133 aa16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 SRSF5Q13243 272 aaKnown RBP16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 DLG2Q15700 870 aa16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 TMCO3Q6UWJ1 677 aa16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 MAP7D3Q8IWC1 876 aa16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 RHOT1Q8IXI2 618 aa16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 NPWQ8N729 165 aa16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 NETO2Q8NC67 525 aa16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 FAM71BQ8TC56 605 aa16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 MRGPRX1Q96LB2 322 aa16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 MKRN2Q9H000 416 aaKnown RBP16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 LRRC19Q9H756 370 aa16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 PRDM16Q9HAZ2 1276 aa16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 ETNK2Q9NVF9 386 aa16.24■□□□□ 0.19
CCDC28A-201ENST00000332797 LRRD1A4D1F6 860 aa16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 DFFAO00273 331 aa16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 DCLK1O15075 740 aa16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 SMAD6O43541 496 aaKnown RBP16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 KDELR3O43731 214 aa16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 BNIP3LO60238 219 aa16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 LILRB5O75023 590 aa16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 PTMAP06454 111 aaKnown RBP16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 IL4RP24394 825 aa16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 SERPINH1P50454 418 aaKnown RBP16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 SERINC3Q13530 473 aa16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 ODF2Q5BJF6 829 aa16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 C9orf64Q5T6V5 341 aa16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 LRRC38Q5VT99 294 aa16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 LEKR1Q6ZMV7 388 aa16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 Q6ZVU0 165 aa16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 TMPRSS6Q8IU80 811 aa16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 FRS2Q8WU20 508 aa16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 RAPGEF5Q92565 580 aa16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 ZNF670Q9BS34 389 aa16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 SLC39A8Q9C0K1 460 aa16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 KLC2Q9H0B6 622 aa16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 FBRSQ9HAH7 460 aa16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 INVSQ9Y283 1065 aa16.23■□□□□ 0.19
CCDC28A-201ENST00000332797 ACTL7AQ9Y615 435 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms