RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 NCKIPSDQ9NZQ3 722 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 BARX2Q9UMQ3 279 aaPredicted RBP10.72□□□□□ -0.69
CLN8-201ENST00000331222 CLTCL1P53675 1640 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 USP42Q9H9J4 1324 aaKnown RBP10.72□□□□□ -0.69
CLN8-201ENST00000331222 TBC1D3DA0A087WVF3 549 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 TBC1D3IA0A087WXS9 549 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 TBC1D3EA0A087X179 549 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 TBC1D3KA0A087X1G2 549 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 SSU72P8A0A1W2PR75 194 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 TBC1D3FA6NER0 549 aaPredicted RBP10.72□□□□□ -0.69
CLN8-201ENST00000331222 TBC1D3LB9A6J9 549 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 NEDD8-MDP1E9PL57 170 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 LIN7AO14910 233 aaPredicted RBP10.72□□□□□ -0.69
CLN8-201ENST00000331222 TBC1D3HP0C7X1 549 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 ZNF7P17097 686 aaPredicted RBP10.72□□□□□ -0.69
CLN8-201ENST00000331222 NUP107P57740 925 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 TBC1D3GQ6DHY5 549 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 TBC1D3CQ6IPX1 549 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 TBC1D3Q8IZP1 549 aaPredicted RBP10.72□□□□□ -0.69
CLN8-201ENST00000331222 RIBC1Q8N443 379 aaPredicted RBP10.72□□□□□ -0.69
CLN8-201ENST00000331222 TSPAN14Q8NG11 270 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 MAGEB18Q96M61 343 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 CDHR5Q9HBB8 845 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 NOD2Q9HC29 1040 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 RABGEF1Q9UJ41 708 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 JCADQ9P266 1359 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 CENPXA8MT69 81 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 MMP13P45452 471 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 SERPINH1P50454 418 aaKnown RBP10.72□□□□□ -0.69
CLN8-201ENST00000331222 C15orf59Q2T9L4 293 aaPredicted RBP10.72□□□□□ -0.69
CLN8-201ENST00000331222 PTPN20Q4JDL3 420 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 FAM126BQ8IXS8 530 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 PRRG3Q9BZD7 231 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 ASB8Q9H765 288 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 TAS2R13Q9NYV9 303 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 OPTCQ9UBM4 332 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 BTRCQ9Y297 605 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 RAD54BQ9Y620 910 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 BCLAF3A2AJT9 711 aaKnown RBP10.72□□□□□ -0.69
CLN8-201ENST00000331222 PSIP1O75475 530 aaKnown RBP10.72□□□□□ -0.69
CLN8-201ENST00000331222 RECQL4O94761 1208 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 TFPIP10646 304 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 VEGFAP15692 232 aaPredicted RBP10.72□□□□□ -0.69
CLN8-201ENST00000331222 CDC25CP30307 473 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 ANTXR2P58335 489 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 PGBD2Q6P3X8 592 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 C4orf22Q6V702 233 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 LPCAT2Q7L5N7 544 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 WDR49Q8IV35 697 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 SLC22A9Q8IVM8 553 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 ADGRG2Q8IZP9 1017 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 STK39Q9UEW8 545 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 ZDHHC9Q9Y397 364 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 NTSR2O95665 410 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 KRT6AP02538 564 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 KRT6BP04259 564 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 GJB1P08034 283 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 KRT6CP48668 564 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 WSCD1Q658N2 575 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 IZUMO2Q6UXV1 221 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 CDH24Q86UP0 819 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 DEFB106AQ8N104 65 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 LNX2Q8N448 690 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 ENKURQ8TC29 256 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 MPP4Q96JB8 637 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 MYH7P12883 1935 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 LRRC7Q96NW7 1537 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 FOXP2O15409 715 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 GAS2O43903 313 aaKnown RBP10.72□□□□□ -0.69
CLN8-201ENST00000331222 CTDNEP1O95476 244 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 ZSCAN5DPP0CG00 497 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 BUD31P41223 144 aaPredicted RBP10.72□□□□□ -0.69
CLN8-201ENST00000331222 ZNF34Q8IZ26 560 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 ROPN1BQ9BZX4 212 aaPredicted RBP10.72□□□□□ -0.69
CLN8-201ENST00000331222 SEMA6BQ9H3T3 888 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 ROPN1Q9HAT0 212 aaPredicted RBP10.72□□□□□ -0.69
CLN8-201ENST00000331222 CNGB3Q9NQW8 809 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 PLK2Q9NYY3 685 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 VPS51Q9UID3 782 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 ZNF222Q9UK12 451 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 ITGA11Q9UKX5 1188 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 IDH2P48735 452 aaKnown RBP10.71□□□□□ -0.69
CLN8-201ENST00000331222 GNA13Q14344 377 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 KCTD21Q4G0X4 260 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 KIAA0408Q6ZU52 694 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 FBXO33Q7Z6M2 555 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 ZNF563Q8TA94 476 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 ACSS2Q9NR19 701 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 ALKQ9UM73 1620 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 RASGRP1O95267 797 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 F9P00740 461 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 RBP1P09455 135 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 ELK3P41970 407 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 EIF2B2P49770 351 aaKnown RBP10.71□□□□□ -0.69
CLN8-201ENST00000331222 SCNN1GP51170 649 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 RCAN1P53805 252 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 ERVK-24P63145 666 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 ALG11Q2TAA5 492 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 MOB2Q70IA6 237 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 SLC5A5Q92911 643 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms