RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 GABRB2P47870 512 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 RGS7P49802 495 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 IRAK1P51617 712 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 GSCP56915 257 aaPredicted RBP6.56□□□□□ -1.36
SMG1-201ENST00000330588 DAB2P98082 770 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 ZBTB16Q05516 673 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 SRSF5Q13243 272 aaKnown RBP6.56□□□□□ -1.36
SMG1-201ENST00000330588 CAMK2GQ13555 558 aaPredicted RBP6.56□□□□□ -1.36
SMG1-201ENST00000330588 STX1AQ16623 288 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 FAM133BQ5BKY9 247 aaKnown RBP6.56□□□□□ -1.36
SMG1-201ENST00000330588 EMC10Q5UCC4 262 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 KLHDC7AQ5VTJ3 777 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 ANO7Q6IWH7 933 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 DENND1BQ6P3S1 775 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 C11orf57Q6ZUT1 292 aaPredicted RBP6.56□□□□□ -1.36
SMG1-201ENST00000330588 DGLUCYQ7Z3D6 616 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 DTX1Q86Y01 620 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 SYT12Q8IV01 421 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 SFTPA1Q8IWL2 248 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 CHPFQ8IZ52 775 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 C12orf50Q8NA57 414 aaPredicted RBP6.56□□□□□ -1.36
SMG1-201ENST00000330588 TMEM35BQ8NCS4 154 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 MSANTD4Q8NCY6 345 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 CEP76Q8TAP6 659 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 DDI1Q8WTU0 396 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 MRRFQ96E11 262 aaKnown RBP6.56□□□□□ -1.36
SMG1-201ENST00000330588 PGAP3Q96FM1 320 aaPredicted RBP6.56□□□□□ -1.36
SMG1-201ENST00000330588 STK33Q9BYT3 514 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 TMEM245Q9H330 911 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 RETREG1Q9H6L5 497 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 OSGEPQ9NPF4 335 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 ANO10Q9NW15 660 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.56□□□□□ -1.36
SMG1-201ENST00000330588 ELOVL2Q9NXB9 296 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 SFMBT1Q9UHJ3 866 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 CYTH4Q9UIA0 394 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 TPX2Q9ULW0 747 aaKnown RBP6.56□□□□□ -1.36
SMG1-201ENST00000330588 SCML1Q9UN30 329 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 STON1Q9Y6Q2 735 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 OTOGLQ3ZCN5 2332 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 MYOFQ9NZM1 2061 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 SPAG17Q6Q759 2223 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 FAM186AA6NE01 2351 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 A0A1W2PP55 124 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 UPK3BL1B0FP48 263 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 UPK3BL2E5RIL1 263 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 E5RJQ4 531 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 CAPN9O14815 690 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 SCAMP3O14828 347 aaKnown RBP6.55□□□□□ -1.36
SMG1-201ENST00000330588 CAVIN2O95810 425 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 TRUB2O95900 331 aaKnown RBP6.55□□□□□ -1.36
SMG1-201ENST00000330588 RECKO95980 971 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 HMBSP08397 361 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 DLDP09622 509 aaKnown RBP6.55□□□□□ -1.36
SMG1-201ENST00000330588 PABPC1P11940 636 aaKnown RBP6.55□□□□□ -1.36
SMG1-201ENST00000330588 UCHL3P15374 230 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 CDC25BP30305 580 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 HLA-FP30511 346 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 OXTRP30559 389 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 HOXC13P31276 330 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 KRT9P35527 623 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 PXNP49023 591 aaPredicted RBP6.55□□□□□ -1.36
SMG1-201ENST00000330588 PLK1P53350 603 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 ATXN1P54253 815 aaKnown RBP6.55□□□□□ -1.36
SMG1-201ENST00000330588 CDK17Q00537 523 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 MYL5Q02045 173 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 LMAN2Q12907 356 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 ZNF234Q14588 700 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 DRAP1Q14919 205 aaPredicted RBP6.55□□□□□ -1.36
SMG1-201ENST00000330588 GEN1Q17RS7 908 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 C5orf22Q49AR2 442 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 MS4A13Q5J8X5 152 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 BRMS1LQ5PSV4 323 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 CCDC183Q5T5S1 534 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 SLC23A3Q6PIS1 610 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 OLFML1Q6UWY5 402 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 TRIM72Q6ZMU5 477 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 WDTC1Q8N5D0 677 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 ATP6V0D2Q8N8Y2 350 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 ANKRD20A12PQ8NF67 263 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 CADM4Q8NFZ8 388 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 GPT2Q8TD30 523 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 CLEC4CQ8WTT0 213 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 HMGB4Q8WW32 186 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 NT5C3BQ969T7 300 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 TTC17Q96AE7 1141 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 FAM149B1Q96BN6 582 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 P2RY11Q96G91 374 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 PPP1R13BQ96KQ4 1090 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 LMLNQ96KR4 655 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 MRGPRX1Q96LB2 322 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 ERGIC2Q96RQ1 377 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 PPP1R9BQ96SB3 815 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 CPXM1Q96SM3 734 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 CRACR2AQ9BSW2 395 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 TPSD1Q9BZJ3 242 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 ARRDC1-AS1Q9H2J1 176 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 ITM2CQ9NQX7 267 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 ST7Q9NRC1 585 aa6.55□□□□□ -1.36
SMG1-201ENST00000330588 SUSD2Q9UGT4 822 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms