RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 RAG1P15918 1043 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 TPH1P17752 444 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 LAG3P18627 525 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 GKAP1Q5VSY0 366 aaPredicted RBP17.29■□□□□ 0.36
DDX41-201ENST00000330503 CIR1Q86X95 450 aaPredicted RBP17.29■□□□□ 0.36
DDX41-201ENST00000330503 DNAAF3Q8N9W5 541 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 TCP10LQ8TDR4 215 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 MYRFLQ96LU7 910 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 TGS1Q96RS0 853 aaKnown RBP17.29■□□□□ 0.36
DDX41-201ENST00000330503 CDK5RAP1Q96SZ6 601 aaKnown RBP17.29■□□□□ 0.36
DDX41-201ENST00000330503 ELAC2Q9BQ52 826 aaKnown RBP17.29■□□□□ 0.36
DDX41-201ENST00000330503 YIPF1Q9Y548 306 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 RFPL1O75677 317 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 KRT37O76014 449 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 ZWINTO95229 277 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 POLBP06746 335 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 TACR2P21452 398 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 GBP2P32456 591 aaPredicted RBP17.29■□□□□ 0.36
DDX41-201ENST00000330503 NEK3P51956 506 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 BMPR2Q13873 1038 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 SPANXN3Q5MJ09 141 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 HECTD3Q5T447 861 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 LVRNQ6Q4G3 990 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 MARK2Q7KZI7 788 aaKnown RBP17.29■□□□□ 0.36
DDX41-201ENST00000330503 TMEM135Q86UB9 458 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 CHSY1Q86X52 802 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 PDZD8Q8NEN9 1154 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 FATE1Q969F0 183 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 RPRD1AQ96P16 312 aaPredicted RBP17.29■□□□□ 0.36
DDX41-201ENST00000330503 FGFR1OP2Q9NVK5 253 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 SLC17A7Q9P2U7 560 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 RPS6KL1Q9Y6S9 549 aa17.29■□□□□ 0.36
DDX41-201ENST00000330503 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.28■□□□□ 0.36
DDX41-201ENST00000330503 COCHO43405 550 aa17.28■□□□□ 0.36
DDX41-201ENST00000330503 C5orf22Q49AR2 442 aa17.28■□□□□ 0.36
DDX41-201ENST00000330503 ACBD5Q5T8D3 534 aaPredicted RBP17.28■□□□□ 0.36
DDX41-201ENST00000330503 LGSNQ5TDP6 509 aa17.28■□□□□ 0.36
DDX41-201ENST00000330503 DENND5AQ6IQ26 1287 aa17.28■□□□□ 0.36
DDX41-201ENST00000330503 IL1RAPL1Q9NZN1 696 aa17.28■□□□□ 0.36
DDX41-201ENST00000330503 AAR2Q9Y312 384 aaKnown RBP17.28■□□□□ 0.36
DDX41-201ENST00000330503 FAM169AQ9Y6X4 670 aa17.28■□□□□ 0.36
DDX41-201ENST00000330503 ACSL4O60488 711 aa17.27■□□□□ 0.36
DDX41-201ENST00000330503 LILRB3O75022 631 aa17.27■□□□□ 0.36
DDX41-201ENST00000330503 EFCAB14O75071 495 aa17.27■□□□□ 0.36
DDX41-201ENST00000330503 ERVK-10P10266 1014 aa17.27■□□□□ 0.36
DDX41-201ENST00000330503 SLC6A4P31645 630 aa17.27■□□□□ 0.36
DDX41-201ENST00000330503 ADRA1AP35348 466 aa17.27■□□□□ 0.36
DDX41-201ENST00000330503 ALDH1A3P47895 512 aa17.27■□□□□ 0.36
DDX41-201ENST00000330503 SF3A3Q12874 501 aaKnown RBP eCLIP17.27■□□□□ 0.363e-6■■■■□ 20.8
DDX41-201ENST00000330503 ANKRD20A4Q4UJ75 823 aa17.27■□□□□ 0.36
DDX41-201ENST00000330503 FAM133BQ5BKY9 247 aaKnown RBP17.27■□□□□ 0.36
DDX41-201ENST00000330503 HHATQ5VTY9 493 aa17.27■□□□□ 0.36
DDX41-201ENST00000330503 NAPEPLDQ6IQ20 393 aa17.27■□□□□ 0.36
DDX41-201ENST00000330503 KLHDC10Q6PID8 442 aa17.27■□□□□ 0.36
DDX41-201ENST00000330503 C16orf59Q7L2K0 433 aa17.27■□□□□ 0.36
DDX41-201ENST00000330503 NECAB2Q7Z6G3 386 aa17.27■□□□□ 0.36
DDX41-201ENST00000330503 SPATS2Q86XZ4 545 aaKnown RBP17.27■□□□□ 0.36
DDX41-201ENST00000330503 CACNA2D3Q8IZS8 1091 aa17.27■□□□□ 0.36
DDX41-201ENST00000330503 TMEM199Q8N511 208 aa17.27■□□□□ 0.36
DDX41-201ENST00000330503 RNF38Q9H0F5 515 aa17.27■□□□□ 0.36
DDX41-201ENST00000330503 SAMD15Q9P1V8 674 aa17.27■□□□□ 0.36
DDX41-201ENST00000330503 ZCWPW2A0A1B0GU75 182 aa17.27■□□□□ 0.35
DDX41-201ENST00000330503 TM9SF1O15321 606 aa17.27■□□□□ 0.35
DDX41-201ENST00000330503 ATP9BO43861 1147 aa17.27■□□□□ 0.35
DDX41-201ENST00000330503 KRT38O76015 456 aa17.27■□□□□ 0.35
DDX41-201ENST00000330503 ANXA9O76027 345 aa17.27■□□□□ 0.35
DDX41-201ENST00000330503 HSPA8P11142 646 aaKnown RBP17.27■□□□□ 0.35
DDX41-201ENST00000330503 ADRA1DP25100 572 aa17.27■□□□□ 0.35
DDX41-201ENST00000330503 SERPINB9P50453 376 aa17.27■□□□□ 0.35
DDX41-201ENST00000330503 MGAT5Q09328 741 aa17.27■□□□□ 0.35
DDX41-201ENST00000330503 CDH17Q12864 832 aa17.27■□□□□ 0.35
DDX41-201ENST00000330503 HNRNPDQ14103 355 aaKnown RBP17.27■□□□□ 0.35
DDX41-201ENST00000330503 FRG1Q14331 258 aaKnown RBP17.27■□□□□ 0.35
DDX41-201ENST00000330503 MROH9Q5TGP6 573 aa17.27■□□□□ 0.35
DDX41-201ENST00000330503 RFWD3Q6PCD5 774 aa17.27■□□□□ 0.35
DDX41-201ENST00000330503 OTOP2Q7RTS6 562 aa17.27■□□□□ 0.35
DDX41-201ENST00000330503 LGI2Q8N0V4 545 aa17.27■□□□□ 0.35
DDX41-201ENST00000330503 TRMT2BQ96GJ1 504 aaKnown RBP17.27■□□□□ 0.35
DDX41-201ENST00000330503 APOPT1Q96IL0 206 aa17.27■□□□□ 0.35
DDX41-201ENST00000330503 CHRAC1Q9NRG0 131 aa17.27■□□□□ 0.35
DDX41-201ENST00000330503 GKN1Q9NS71 199 aa17.27■□□□□ 0.35
DDX41-201ENST00000330503 DONSONQ9NYP3 566 aa17.27■□□□□ 0.35
DDX41-201ENST00000330503 TRPM5Q9NZQ8 1165 aa17.27■□□□□ 0.35
DDX41-201ENST00000330503 PSAT1Q9Y617 370 aa17.27■□□□□ 0.35
DDX41-201ENST00000330503 PTPRSQ13332 1948 aa17.27■□□□□ 0.35
DDX41-201ENST00000330503 KIAA0100Q14667 2235 aaKnown RBP17.26■□□□□ 0.35
DDX41-201ENST00000330503 FAM237BA0A1B0GVD1 139 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 MAGEB16A2A368 324 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 LPXNO60711 386 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 USP1O94782 785 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 KLKB1P03952 638 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 URODP06132 367 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 DNAJB2P25686 324 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 MTA1Q13330 715 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 PDK4Q16654 411 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 ANO4Q32M45 955 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 CGB2Q6NT52 195 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 TIFABQ6ZNK6 161 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 RGS9BPQ6ZS82 235 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 DNAJB7Q7Z6W7 309 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 501.8 ms