RNA–Protein interactions for RNA: ENST00000328796.4

CLDN6-201, Transcript of claudin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN6, Length 1,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6-201ENST00000328796 OR2T3Q8NH03 318 aa17.24■□□□□ 0.35
CLDN6-201ENST00000328796 FRS2Q8WU20 508 aa17.24■□□□□ 0.35
CLDN6-201ENST00000328796 GAB3Q8WWW8 586 aa17.24■□□□□ 0.35
CLDN6-201ENST00000328796 TSC1Q92574 1164 aa17.24■□□□□ 0.35
CLDN6-201ENST00000328796 ERLEC1Q96DZ1 483 aa17.24■□□□□ 0.35
CLDN6-201ENST00000328796 MRGPRX1Q96LB2 322 aa17.24■□□□□ 0.35
CLDN6-201ENST00000328796 PHOX2BQ99453 314 aa17.24■□□□□ 0.35
CLDN6-201ENST00000328796 SPON2Q9BUD6 331 aa17.24■□□□□ 0.35
CLDN6-201ENST00000328796 EPC1Q9H2F5 836 aa17.24■□□□□ 0.35
CLDN6-201ENST00000328796 MTG2Q9H4K7 406 aa17.24■□□□□ 0.35
CLDN6-201ENST00000328796 PCDH18Q9HCL0 1135 aa17.24■□□□□ 0.35
CLDN6-201ENST00000328796 BCCIPQ9P287 314 aaKnown RBP eCLIP17.24■□□□□ 0.35
CLDN6-201ENST00000328796 GON4LQ3T8J9 2241 aa17.23■□□□□ 0.35
CLDN6-201ENST00000328796 EDDM13A0A1B0GTR0 161 aa17.23■□□□□ 0.35
CLDN6-201ENST00000328796 TARSL2A2RTX5 802 aaKnown RBP17.23■□□□□ 0.35
CLDN6-201ENST00000328796 BTNL10A8MVZ5 291 aa17.23■□□□□ 0.35
CLDN6-201ENST00000328796 PJA2O43164 708 aa17.23■□□□□ 0.35
CLDN6-201ENST00000328796 ZBTB24O43167 697 aaPredicted RBP17.23■□□□□ 0.35
CLDN6-201ENST00000328796 MT-CO1P00395 513 aa17.23■□□□□ 0.35
CLDN6-201ENST00000328796 KRT7P08729 469 aa17.23■□□□□ 0.35
CLDN6-201ENST00000328796 SRCP12931 536 aa17.23■□□□□ 0.35
CLDN6-201ENST00000328796 ERCC2P18074 760 aa17.23■□□□□ 0.35
CLDN6-201ENST00000328796 GLDCP23378 1020 aa17.23■□□□□ 0.35
CLDN6-201ENST00000328796 ARL4AP40617 200 aa17.23■□□□□ 0.35
CLDN6-201ENST00000328796 VAV2P52735 878 aa17.23■□□□□ 0.35
CLDN6-201ENST00000328796 SLC20A2Q08357 652 aa17.23■□□□□ 0.35
CLDN6-201ENST00000328796 SRSF5Q13243 272 aaKnown RBP17.23■□□□□ 0.35
CLDN6-201ENST00000328796 POLD3Q15054 466 aaPredicted RBP17.23■□□□□ 0.35
CLDN6-201ENST00000328796 ATP13A4Q4VNC1 1196 aa17.23■□□□□ 0.35
CLDN6-201ENST00000328796 C9orf64Q5T6V5 341 aa17.23■□□□□ 0.35
CLDN6-201ENST00000328796 METTL3Q86U44 580 aaKnown RBP17.23■□□□□ 0.35
CLDN6-201ENST00000328796 TMPRSS6Q8IU80 811 aa17.23■□□□□ 0.35
CLDN6-201ENST00000328796 PGBD3Q8N328 593 aa17.23■□□□□ 0.35
CLDN6-201ENST00000328796 PTPRN2Q92932 1015 aa17.23■□□□□ 0.35
CLDN6-201ENST00000328796 KLC2Q9H0B6 622 aa17.23■□□□□ 0.35
CLDN6-201ENST00000328796 SLC6A17Q9H1V8 727 aa17.23■□□□□ 0.35
CLDN6-201ENST00000328796 PRDM16Q9HAZ2 1276 aa17.23■□□□□ 0.35
CLDN6-201ENST00000328796 RCOR3Q9P2K3 495 aaPredicted RBP17.23■□□□□ 0.35
CLDN6-201ENST00000328796 RASA4BC9J798 803 aa17.22■□□□□ 0.35
CLDN6-201ENST00000328796 CBX4O00257 560 aa17.22■□□□□ 0.35
CLDN6-201ENST00000328796 DAPK3O43293 454 aa17.22■□□□□ 0.35
CLDN6-201ENST00000328796 RASA4O43374 803 aa17.22■□□□□ 0.35
CLDN6-201ENST00000328796 BUB1BO60566 1050 aaPredicted RBP17.22■□□□□ 0.35
CLDN6-201ENST00000328796 SIN3BO75182 1162 aa17.22■□□□□ 0.35
CLDN6-201ENST00000328796 RPP40O75818 363 aaKnown RBP17.22■□□□□ 0.35
CLDN6-201ENST00000328796 P2RY2P41231 377 aa17.22■□□□□ 0.35
CLDN6-201ENST00000328796 SLC1A1P43005 524 aa17.22■□□□□ 0.35
CLDN6-201ENST00000328796 NOP2P46087 812 aaKnown RBP17.22■□□□□ 0.35
CLDN6-201ENST00000328796 NDST2P52849 883 aa17.22■□□□□ 0.35
CLDN6-201ENST00000328796 CDH6P55285 790 aa17.22■□□□□ 0.35
CLDN6-201ENST00000328796 ARF5P84085 180 aa17.22■□□□□ 0.35
CLDN6-201ENST00000328796 DLG2Q15700 870 aa17.22■□□□□ 0.35
CLDN6-201ENST00000328796 PARP15Q460N3 678 aa17.22■□□□□ 0.35
CLDN6-201ENST00000328796 USP39Q53GS9 565 aaKnown RBP17.22■□□□□ 0.35
CLDN6-201ENST00000328796 LRRC38Q5VT99 294 aa17.22■□□□□ 0.35
CLDN6-201ENST00000328796 AFMIDQ63HM1 303 aa17.22■□□□□ 0.35
CLDN6-201ENST00000328796 IL31Q6EBC2 164 aa17.22■□□□□ 0.35
CLDN6-201ENST00000328796 RETSATQ6NUM9 610 aa17.22■□□□□ 0.35
CLDN6-201ENST00000328796 CCDC112Q8NEF3 446 aa17.22■□□□□ 0.35
CLDN6-201ENST00000328796 CSPG4P5Q96PW8 444 aa17.22■□□□□ 0.35
CLDN6-201ENST00000328796 LACRTQ9GZZ8 138 aa17.22■□□□□ 0.35
CLDN6-201ENST00000328796 LRRC19Q9H756 370 aa17.22■□□□□ 0.35
CLDN6-201ENST00000328796 SALL4Q9UJQ4 1053 aa17.22■□□□□ 0.35
CLDN6-201ENST00000328796 THADAQ6YHU6 1953 aa17.21■□□□□ 0.35
CLDN6-201ENST00000328796 DCLK1O15075 740 aa17.21■□□□□ 0.35
CLDN6-201ENST00000328796 KDELR3O43731 214 aa17.21■□□□□ 0.35
CLDN6-201ENST00000328796 CD160O95971 181 aa17.21■□□□□ 0.35
CLDN6-201ENST00000328796 CD48P09326 243 aa17.21■□□□□ 0.35
CLDN6-201ENST00000328796 IL4RP24394 825 aa17.21■□□□□ 0.35
CLDN6-201ENST00000328796 GJC1P36383 396 aa17.21■□□□□ 0.35
CLDN6-201ENST00000328796 MRE11P49959 708 aa17.21■□□□□ 0.35
CLDN6-201ENST00000328796 CLCN6P51797 869 aa17.21■□□□□ 0.35
CLDN6-201ENST00000328796 KRT81Q14533 505 aa17.21■□□□□ 0.35
CLDN6-201ENST00000328796 PDK2Q15119 407 aa17.21■□□□□ 0.35
CLDN6-201ENST00000328796 MAP7D1Q3KQU3 841 aa17.21■□□□□ 0.35
CLDN6-201ENST00000328796 LINGO4Q6UY18 593 aa17.21■□□□□ 0.35
CLDN6-201ENST00000328796 ARHGAP12Q8IWW6 846 aa17.21■□□□□ 0.35
CLDN6-201ENST00000328796 SUMF1Q8NBK3 374 aa17.21■□□□□ 0.35
CLDN6-201ENST00000328796 NKD2Q969F2 451 aaPredicted RBP17.21■□□□□ 0.35
CLDN6-201ENST00000328796 HMCESQ96FZ2 354 aa17.21■□□□□ 0.35
CLDN6-201ENST00000328796 CALR3Q96L12 384 aaKnown RBP17.21■□□□□ 0.35
CLDN6-201ENST00000328796 DESI2Q9BSY9 194 aa17.21■□□□□ 0.35
CLDN6-201ENST00000328796 RSPH9Q9H1X1 276 aaPredicted RBP17.21■□□□□ 0.35
CLDN6-201ENST00000328796 NUMA1Q14980 2115 aa17.21■□□□□ 0.35
CLDN6-201ENST00000328796 GVINP1Q7Z2Y8 2422 aa17.21■□□□□ 0.34
CLDN6-201ENST00000328796 PTPRZ1P23471 2315 aaPredicted RBP17.2■□□□□ 0.34
CLDN6-201ENST00000328796 ZSCAN5CA6NGD5 496 aaPredicted RBP17.2■□□□□ 0.34
CLDN6-201ENST00000328796 K7ERQ8 282 aa17.2■□□□□ 0.34
CLDN6-201ENST00000328796 SMAD6O43541 496 aaKnown RBP17.2■□□□□ 0.34
CLDN6-201ENST00000328796 VAV1P15498 845 aa17.2■□□□□ 0.34
CLDN6-201ENST00000328796 COMTP21964 271 aa17.2■□□□□ 0.34
CLDN6-201ENST00000328796 AMPD1P23109 780 aa17.2■□□□□ 0.34
CLDN6-201ENST00000328796 SERPINH1P50454 418 aaKnown RBP17.2■□□□□ 0.34
CLDN6-201ENST00000328796 SERINC3Q13530 473 aa17.2■□□□□ 0.34
CLDN6-201ENST00000328796 BYSLQ13895 437 aaKnown RBP17.2■□□□□ 0.34
CLDN6-201ENST00000328796 DPYSL3Q14195 570 aa17.2■□□□□ 0.34
CLDN6-201ENST00000328796 C11orf63Q6NUN7 778 aa17.2■□□□□ 0.34
CLDN6-201ENST00000328796 KIAA1324Q6UXG2 1013 aaKnown RBP17.2■□□□□ 0.34
CLDN6-201ENST00000328796 LRRC8AQ8IWT6 810 aa17.2■□□□□ 0.34
CLDN6-201ENST00000328796 LZTR1Q8N653 840 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms