RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 ANXA9O76027 345 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 POLBP06746 335 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 ALDH1A3P47895 512 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 SERPINB9P50453 376 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 SLC1A5Q15758 541 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 HECTD3Q5T447 861 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 HHATQ5VTY9 493 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 MICALCLQ6ZW33 695 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 MARK2Q7KZI7 788 aaKnown RBP15.24■□□□□ 0.03
TPM3-205ENST00000328159 NECAB2Q7Z6G3 386 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 LINC00523Q86TU6 105 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 UNC5BQ8IZJ1 945 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 CACNA2D3Q8IZS8 1091 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 FATE1Q969F0 183 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 HMCESQ96FZ2 354 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 MYRFLQ96LU7 910 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 TGS1Q96RS0 853 aaKnown RBP15.24■□□□□ 0.03
TPM3-205ENST00000328159 APOL2Q9BQE5 337 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 NACA2Q9H009 215 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 GGA2Q9UJY4 613 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.23■□□□□ 0.03
TPM3-205ENST00000328159 KRT38O76015 456 aa15.23■□□□□ 0.03
TPM3-205ENST00000328159 NEBLO76041 1014 aa15.23■□□□□ 0.03
TPM3-205ENST00000328159 BAIAP3O94812 1187 aa15.23■□□□□ 0.03
TPM3-205ENST00000328159 GJB5O95377 273 aa15.23■□□□□ 0.03
TPM3-205ENST00000328159 HLA-DQB2P05538 268 aa15.23■□□□□ 0.03
TPM3-205ENST00000328159 FOXN2P32314 431 aa15.23■□□□□ 0.03
TPM3-205ENST00000328159 SLC18A2Q05940 514 aa15.23■□□□□ 0.03
TPM3-205ENST00000328159 NIPAL4Q0D2K0 466 aa15.23■□□□□ 0.03
TPM3-205ENST00000328159 NAB1Q13506 487 aa15.23■□□□□ 0.03
TPM3-205ENST00000328159 KLHDC10Q6PID8 442 aa15.23■□□□□ 0.03
TPM3-205ENST00000328159 SH2D5Q6ZV89 423 aa15.23■□□□□ 0.03
TPM3-205ENST00000328159 PIGWQ7Z7B1 504 aa15.23■□□□□ 0.03
TPM3-205ENST00000328159 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.23■□□□□ 0.03
TPM3-205ENST00000328159 SPATA22Q8NHS9 363 aa15.23■□□□□ 0.03
TPM3-205ENST00000328159 CDKL2Q92772 493 aa15.23■□□□□ 0.03
TPM3-205ENST00000328159 PPP1R2P1Q96PQ5 205 aa15.23■□□□□ 0.03
TPM3-205ENST00000328159 YME1L1Q96TA2 773 aa15.23■□□□□ 0.03
TPM3-205ENST00000328159 TRPM5Q9NZQ8 1165 aa15.23■□□□□ 0.03
TPM3-205ENST00000328159 ZNF212Q9UDV6 495 aa15.23■□□□□ 0.03
TPM3-205ENST00000328159 RPS6KL1Q9Y6S9 549 aa15.23■□□□□ 0.03
TPM3-205ENST00000328159 F5H5T6 163 aa15.22■□□□□ 0.03
TPM3-205ENST00000328159 TM9SF1O15321 606 aa15.22■□□□□ 0.03
TPM3-205ENST00000328159 ACSL4O60488 711 aa15.22■□□□□ 0.03
TPM3-205ENST00000328159 PEX11BO96011 259 aa15.22■□□□□ 0.03
TPM3-205ENST00000328159 HSPA8P11142 646 aaKnown RBP15.22■□□□□ 0.03
TPM3-205ENST00000328159 PYGBP11216 843 aa15.22■□□□□ 0.03
TPM3-205ENST00000328159 GEMP55040 296 aa15.22■□□□□ 0.03
TPM3-205ENST00000328159 MGAT5Q09328 741 aa15.22■□□□□ 0.03
TPM3-205ENST00000328159 CDH17Q12864 832 aa15.22■□□□□ 0.03
TPM3-205ENST00000328159 PLD1Q13393 1074 aa15.22■□□□□ 0.03
TPM3-205ENST00000328159 TAF12Q16514 161 aa15.22■□□□□ 0.03
TPM3-205ENST00000328159 CERCAMQ5T4B2 595 aa15.22■□□□□ 0.03
TPM3-205ENST00000328159 ZNF449Q6P9G9 518 aa15.22■□□□□ 0.03
TPM3-205ENST00000328159 LVRNQ6Q4G3 990 aa15.22■□□□□ 0.03
TPM3-205ENST00000328159 CES3Q6UWW8 571 aa15.22■□□□□ 0.03
TPM3-205ENST00000328159 TCP10LQ8TDR4 215 aa15.22■□□□□ 0.03
TPM3-205ENST00000328159 AUTS2Q8WXX7 1259 aa15.22■□□□□ 0.03
TPM3-205ENST00000328159 MTBPQ96DY7 904 aa15.22■□□□□ 0.03
TPM3-205ENST00000328159 MYEOVQ96EZ4 313 aa15.22■□□□□ 0.03
TPM3-205ENST00000328159 TRMT2BQ96GJ1 504 aaKnown RBP15.22■□□□□ 0.03
TPM3-205ENST00000328159 APOPT1Q96IL0 206 aa15.22■□□□□ 0.03
TPM3-205ENST00000328159 FCRL3Q96P31 734 aaPredicted RBP15.22■□□□□ 0.03
TPM3-205ENST00000328159 TBL1YQ9BQ87 522 aa15.22■□□□□ 0.03
TPM3-205ENST00000328159 PRDM4Q9UKN5 801 aa15.22■□□□□ 0.03
TPM3-205ENST00000328159 ANAPC1Q9H1A4 1944 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 FAM237BA0A1B0GVD1 139 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 MAGEB16A2A368 324 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 PRRG1O14668 218 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 COCHO43405 550 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 LPXNO60711 386 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 TAC1P20366 129 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 DNAJB2P25686 324 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 CNTFP26441 200 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 PPM1AP35813 382 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 MAPKAPK2P49137 400 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 NEK3P51956 506 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 BMPR2Q13873 1038 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 HNRNPDQ14103 355 aaKnown RBP15.21■□□□□ 0.03
TPM3-205ENST00000328159 FRG1Q14331 258 aaKnown RBP15.21■□□□□ 0.03
TPM3-205ENST00000328159 VEPH1Q14D04 833 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 SEPT7Q16181 437 aaKnown RBP15.21■□□□□ 0.03
TPM3-205ENST00000328159 C5orf22Q49AR2 442 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 TMEM135Q86UB9 458 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 CIR1Q86X95 450 aaPredicted RBP15.21■□□□□ 0.03
TPM3-205ENST00000328159 LGI2Q8N0V4 545 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.21■□□□□ 0.03
TPM3-205ENST00000328159 ZNF669Q96BR6 464 aaPredicted RBP15.21■□□□□ 0.03
TPM3-205ENST00000328159 CERS2Q96G23 380 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 ELAC2Q9BQ52 826 aaKnown RBP15.21■□□□□ 0.03
TPM3-205ENST00000328159 IL22Q9GZX6 179 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 SP110Q9HB58 689 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 IL23AQ9NPF7 189 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 MRPL17Q9NRX2 175 aaKnown RBP15.21■□□□□ 0.03
TPM3-205ENST00000328159 FGFR1OP2Q9NVK5 253 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 PCDH10Q9P2E7 1040 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 GRID1Q9ULK0 1009 aa15.21■□□□□ 0.03
TPM3-205ENST00000328159 J3KR12 359 aa15.21■□□□□ 0.02
TPM3-205ENST00000328159 ATP9BO43861 1147 aa15.21■□□□□ 0.02
TPM3-205ENST00000328159 RAMP2O60895 175 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms