RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 ELF3P78545 371 aaPredicted RBP6.43□□□□□ -1.38
SSH1-202ENST00000326495 ATP13A5Q4VNC0 1218 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 LINC00471Q8N535 108 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 PABPC5Q96DU9 382 aaKnown RBP6.43□□□□□ -1.38
SSH1-202ENST00000326495 PAX7P23759 505 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 KCNJ1P48048 391 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 SLC16A1P53985 500 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 HERVK_113P62684 666 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 TUBA1BP68363 451 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 IL5RAQ01344 420 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 VAC14Q08AM6 782 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 ERICH5Q6P6B1 374 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 TUBA1AQ71U36 451 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 CHMP1BQ7LBR1 199 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 NKAPQ8N5F7 415 aaKnown RBP6.43□□□□□ -1.38
SSH1-202ENST00000326495 DHRSXQ8N5I4 330 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 NSUN4Q96CB9 384 aaKnown RBP6.43□□□□□ -1.38
SSH1-202ENST00000326495 RNF31Q96EP0 1072 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 APOL5Q9BWW9 433 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 MRPL39Q9NYK5 338 aaKnown RBP6.43□□□□□ -1.38
SSH1-202ENST00000326495 RCOR3Q9P2K3 495 aaPredicted RBP6.43□□□□□ -1.38
SSH1-202ENST00000326495 CDH9Q9ULB4 789 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 SH3GLB1Q9Y371 365 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 SH3BP1Q9Y3L3 701 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 SPATA31D1Q6ZQQ2 1576 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 CLOCKO15516 846 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 RGS14O43566 566 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 MAGEC1O60732 1142 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 SUSD4Q5VX71 490 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 RETSATQ6NUM9 610 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 WDR49Q8IV35 697 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 BORCS5Q969J3 196 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 PPP1R16BQ96T49 567 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 HOPXQ9BPY8 73 aaPredicted RBP6.43□□□□□ -1.38
SSH1-202ENST00000326495 CCDC177Q9NQR7 707 aaPredicted RBP6.43□□□□□ -1.38
SSH1-202ENST00000326495 PCYOX1Q9UHG3 505 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 A0A087X0T9 212 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 E9PBE3 544 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 OGTO15294 1046 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 ATG7O95352 703 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 PSMG1O95456 288 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 GLI1P08151 1106 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 FAM228BP0C875 321 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 EIF4BP23588 611 aaKnown RBP6.43□□□□□ -1.38
SSH1-202ENST00000326495 ASMTP46597 345 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 VPS26BQ4G0F5 336 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 AGKQ53H12 422 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 TBC1D21Q8IYX1 336 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 FHDC1Q9C0D6 1143 aaPredicted RBP6.43□□□□□ -1.38
SSH1-202ENST00000326495 SPAG4Q9NPE6 437 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 HPS4Q9NQG7 708 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 NECTIN3Q9NQS3 549 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 RPS6KB2Q9UBS0 482 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 SIN3BO75182 1162 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 FYNP06241 537 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 CCDC166P0CW27 439 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 COL6A2P12110 1019 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 SREBF2Q12772 1141 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 ZNF268Q14587 947 aaPredicted RBP6.43□□□□□ -1.38
SSH1-202ENST00000326495 TRIM40Q6P9F5 258 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 ATP6V1C2Q8NEY4 427 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 CYLDQ9NQC7 956 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 KCNH7Q9NS40 1196 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.43□□□□□ -1.38
SSH1-202ENST00000326495 GPR182O15218 404 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 EPN2O95208 641 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 KLK7P49862 253 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 NEK3P51956 506 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 NEDD8Q15843 81 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 ZNF574Q6ZN55 896 aaPredicted RBP6.43□□□□□ -1.38
SSH1-202ENST00000326495 RFKQ969G6 155 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 MRPL9Q9BYD2 267 aaKnown RBP6.43□□□□□ -1.38
SSH1-202ENST00000326495 SENP6Q9GZR1 1112 aaPredicted RBP6.43□□□□□ -1.38
SSH1-202ENST00000326495 KCTD10Q9H3F6 313 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 ELOVL6Q9H5J4 265 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 DNAJC5BQ9UF47 199 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 SNX7Q9UNH6 387 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 SLC9A8Q9Y2E8 581 aa6.43□□□□□ -1.38
SSH1-202ENST00000326495 NPHP3-ACAD11A0A0J9YXS1 232 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 SMCO3A2RU48 225 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 GH1P01241 217 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 PCNAP12004 261 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 PRDX5P30044 214 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 ACOT2P49753 483 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 TAF6P49848 677 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 MTTPP55157 894 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 TDRD10Q5VZ19 366 aaKnown RBP6.42□□□□□ -1.38
SSH1-202ENST00000326495 ADAMTSL2Q86TH1 951 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 SPOCK2Q92563 424 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 OTUD5Q96G74 571 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 APOL2Q9BQE5 337 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 KIFC1Q9BW19 673 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 YTHDF1Q9BYJ9 559 aaKnown RBP6.42□□□□□ -1.38
SSH1-202ENST00000326495 REEP1Q9H902 201 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 CAPN6Q9Y6Q1 641 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 GAKO14976 1311 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 GTF2E2P29084 291 aaKnown RBP6.42□□□□□ -1.38
SSH1-202ENST00000326495 PRKCEQ02156 737 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 ERMARDQ5T6L9 678 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 ZNF410Q86VK4 478 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms