RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 NTHL1P78549 312 aa13.06□□□□□ -0.32
DDX39A-202ENST00000324340 KCTD19Q17RG1 926 aaPredicted RBP13.06□□□□□ -0.32
DDX39A-202ENST00000324340 P3H1Q32P28 736 aa13.06□□□□□ -0.32
DDX39A-202ENST00000324340 ZDHHC24Q6UX98 284 aa13.06□□□□□ -0.32
DDX39A-202ENST00000324340 C4orf22Q6V702 233 aa13.06□□□□□ -0.32
DDX39A-202ENST00000324340 LRRC49Q8IUZ0 686 aa13.06□□□□□ -0.32
DDX39A-202ENST00000324340 MFN1Q8IWA4 741 aa13.06□□□□□ -0.32
DDX39A-202ENST00000324340 TP53INP2Q8IXH6 220 aa13.06□□□□□ -0.32
DDX39A-202ENST00000324340 LGI2Q8N0V4 545 aa13.06□□□□□ -0.32
DDX39A-202ENST00000324340 FAM71DQ8N9W8 422 aa13.06□□□□□ -0.32
DDX39A-202ENST00000324340 BBOF1Q8ND07 529 aa13.06□□□□□ -0.32
DDX39A-202ENST00000324340 ART4Q93070 314 aa13.06□□□□□ -0.32
DDX39A-202ENST00000324340 MYEOVQ96EZ4 313 aa13.06□□□□□ -0.32
DDX39A-202ENST00000324340 SNF8Q96H20 258 aa13.06□□□□□ -0.32
DDX39A-202ENST00000324340 PRICKLE1Q96MT3 831 aaPredicted RBP13.06□□□□□ -0.32
DDX39A-202ENST00000324340 RPRD1AQ96P16 312 aaPredicted RBP13.06□□□□□ -0.32
DDX39A-202ENST00000324340 TSGA13Q96PP4 275 aa13.06□□□□□ -0.32
DDX39A-202ENST00000324340 TRIM31Q9BZY9 425 aa13.06□□□□□ -0.32
DDX39A-202ENST00000324340 NOL6Q9H6R4 1146 aaKnown RBP13.06□□□□□ -0.32
DDX39A-202ENST00000324340 ZDHHC18Q9NUE0 388 aa13.06□□□□□ -0.32
DDX39A-202ENST00000324340 NDFIP2Q9NV92 336 aa13.06□□□□□ -0.32
DDX39A-202ENST00000324340 CTNNAL1Q9UBT7 734 aa13.06□□□□□ -0.32
DDX39A-202ENST00000324340 ASIC3Q9UHC3 531 aa13.06□□□□□ -0.32
DDX39A-202ENST00000324340 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.06□□□□□ -0.32
DDX39A-202ENST00000324340 C2orf16Q68DN1 1984 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 DOCK6Q96HP0 2047 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 CCT8L1PA6NM43 557 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 LEFTY2O00292 366 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 KCNN4O15554 427 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 GCATO75600 419 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 WFS1O76024 890 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 CNTN5O94779 1100 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 IFNB1P01574 187 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 ZSCAN5DPP0CG00 497 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 VAV1P15498 845 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 RPL22P35268 128 aaKnown RBP13.05□□□□□ -0.32
DDX39A-202ENST00000324340 AVPR1AP37288 418 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 ADCY8P40145 1251 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 CDH4P55283 916 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 PPP2R2AP63151 447 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 TRIP13Q15645 432 aaPredicted RBP13.05□□□□□ -0.32
DDX39A-202ENST00000324340 TCEAL5Q5H9L2 206 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 RABGAP1LQ5R372 815 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 TTC39BQ5VTQ0 682 aaPredicted RBP13.05□□□□□ -0.32
DDX39A-202ENST00000324340 HEATR6Q6AI08 1181 aaKnown RBP13.05□□□□□ -0.32
DDX39A-202ENST00000324340 CAPRIN2Q6IMN6 1127 aaKnown RBP13.05□□□□□ -0.32
DDX39A-202ENST00000324340 RFWD3Q6PCD5 774 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 CHST9Q7L1S5 443 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 PRUNE1Q86TP1 453 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 CPXM2Q8N436 756 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 C12orf76Q8N812 135 aaPredicted RBP13.05□□□□□ -0.32
DDX39A-202ENST00000324340 KIAA1958Q8N8K9 716 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 ZFAND2BQ8WV99 257 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 HTR3CQ8WXA8 447 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 IFT81Q8WYA0 676 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 GDAP1L1Q96MZ0 367 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 LGMNQ99538 433 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 PLCD4Q9BRC7 762 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 SLC39A8Q9C0K1 460 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 NEUROG2Q9H2A3 272 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 ADAM7Q9H2U9 754 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 PIDD1Q9HB75 910 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 HAUS2Q9NVX0 235 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 CHD7Q9P2D1 2997 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 LSM7Q9UK45 103 aaKnown RBP13.05□□□□□ -0.32
DDX39A-202ENST00000324340 NFU1Q9UMS0 254 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 SLC12A4Q9UP95 1085 aa13.05□□□□□ -0.32
DDX39A-202ENST00000324340 NUP210Q8TEM1 1887 aaPredicted RBP13.05□□□□□ -0.32
DDX39A-202ENST00000324340 NYNRINQ9P2P1 1898 aaKnown RBP13.04□□□□□ -0.32
DDX39A-202ENST00000324340 CHD5Q8TDI0 1954 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 E2F8A0AVK6 867 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 NDC80O14777 642 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 MTSS1O43312 755 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 SMNDC1O75940 238 aaKnown RBP eCLIP13.04□□□□□ -0.327e-7■■□□□ 13.3
DDX39A-202ENST00000324340 CEBPBP17676 345 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 POU3F3P20264 500 aaPredicted RBP13.04□□□□□ -0.32
DDX39A-202ENST00000324340 CCNCP24863 283 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 YBEYP58557 167 aaPredicted RBP13.04□□□□□ -0.32
DDX39A-202ENST00000324340 CAV1Q03135 178 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 CALCOCO2Q13137 446 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 ADAM15Q13444 863 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 BLMHQ13867 455 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 ANKRD54Q6NXT1 300 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 RHBDF2Q6PJF5 856 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 POTEHQ6S545 545 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 TMC5Q6UXY8 1006 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 GPR149Q86SP6 731 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 SH2D3CQ8N5H7 860 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 CCDC33Q8N5R6 958 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 GBP7Q8N8V2 638 aaPredicted RBP13.04□□□□□ -0.32
DDX39A-202ENST00000324340 NETO2Q8NC67 525 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 CCDC197Q8NCU1 140 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 USP13Q92995 863 aaPredicted RBP13.04□□□□□ -0.32
DDX39A-202ENST00000324340 FATE1Q969F0 183 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 P2RY11Q96G91 374 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 CELF6Q96J87 481 aaKnown RBP13.04□□□□□ -0.32
DDX39A-202ENST00000324340 FERMT1Q9BQL6 677 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 CCDC134Q9H6E4 229 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 TDP1Q9NUW8 608 aa13.04□□□□□ -0.32
DDX39A-202ENST00000324340 PAK5Q9P286 719 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms