RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 MBL2P11226 248 aaPredicted RBP6.9□□□□□ -1.31
CSTF3-201ENST00000323959 MEOX1P50221 254 aa6.9□□□□□ -1.31
CSTF3-201ENST00000323959 KCNMA1Q12791 1236 aa6.9□□□□□ -1.31
CSTF3-201ENST00000323959 MIIPQ5JXC2 388 aa6.9□□□□□ -1.31
CSTF3-201ENST00000323959 JMJD6Q6NYC1 403 aaPredicted RBP6.9□□□□□ -1.31
CSTF3-201ENST00000323959 MTFR2Q6P444 385 aa6.9□□□□□ -1.31
CSTF3-201ENST00000323959 KCNK18Q7Z418 384 aa6.9□□□□□ -1.31
CSTF3-201ENST00000323959 B3GNT8Q7Z7M8 397 aa6.9□□□□□ -1.31
CSTF3-201ENST00000323959 ANKRD20A12PQ8NF67 263 aa6.9□□□□□ -1.31
CSTF3-201ENST00000323959 C18orf12Q96KH6 178 aa6.9□□□□□ -1.31
CSTF3-201ENST00000323959 SENP8Q96LD8 212 aa6.9□□□□□ -1.31
CSTF3-201ENST00000323959 ERGIC2Q96RQ1 377 aa6.9□□□□□ -1.31
CSTF3-201ENST00000323959 KCTD10Q9H3F6 313 aa6.9□□□□□ -1.31
CSTF3-201ENST00000323959 KCNF1Q9H3M0 494 aa6.9□□□□□ -1.31
CSTF3-201ENST00000323959 MLXIPLQ9NP71 852 aa6.9□□□□□ -1.31
CSTF3-201ENST00000323959 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.9□□□□□ -1.31
CSTF3-201ENST00000323959 SLC12A8A0AV02 714 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 ZNF840PA6NDX5 716 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 PDXKO00764 312 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 CCP110O43303 1012 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 KCNAB3O43448 404 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 RABIFP47224 123 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 EFNA5P52803 228 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 MAPK10P53779 464 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 UBASH3AP57075 661 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 FOXM1Q08050 763 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 MCM6Q14566 821 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 STAT4Q14765 748 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 SPECC1LQ69YQ0 1117 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 DRC7Q8IY82 874 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 OR6C4Q8NGE1 309 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 ZSWIM4Q9H7M6 989 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 PLEKHA5Q9HAU0 1116 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 MAP10Q9P2G4 905 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 UBQLN1Q9UMX0 589 aaKnown RBP6.89□□□□□ -1.31
CSTF3-201ENST00000323959 LGALS16A8MUM7 142 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 NEDD8-MDP1E9PL57 170 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 PRAMEF26H0Y7S4 382 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 BIN1O00499 593 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 GPR15P49685 360 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 CCZ1BP86790 482 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 CCZ1P86791 482 aaPredicted RBP6.89□□□□□ -1.31
CSTF3-201ENST00000323959 ABHD18Q0P651 414 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 CLPPQ16740 277 aaPredicted RBP6.89□□□□□ -1.31
CSTF3-201ENST00000323959 FILIP1LQ4L180 1135 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 SERPINA13PQ6UXR4 307 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 ANKS1BQ7Z6G8 1248 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 IQCKQ8N0W5 287 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 GOLGA5Q8TBA6 731 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 OVCA2Q8WZ82 227 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 FIZ1Q96SL8 496 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 BARD1Q99728 777 aaKnown RBP6.89□□□□□ -1.31
CSTF3-201ENST00000323959 NTPCRQ9BSD7 190 aaKnown RBP6.89□□□□□ -1.31
CSTF3-201ENST00000323959 ELOVL2Q9NXB9 296 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 TBC1D7Q9P0N9 293 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 SUCOQ9UBS9 1254 aaKnown RBP6.89□□□□□ -1.31
CSTF3-201ENST00000323959 SUN2Q9UH99 717 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 KIAA1024Q9UPX6 916 aa6.89□□□□□ -1.31
CSTF3-201ENST00000323959 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.89□□□□□ -1.317e-13■□□□□ 10.1
CSTF3-201ENST00000323959 EML1O00423 815 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 STX10O60499 249 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 HNRNPH3P31942 346 aaKnown RBP6.88□□□□□ -1.31
CSTF3-201ENST00000323959 UGT1A3P35503 534 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 MFAP3P55082 362 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 STK4Q13043 487 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 KCNJ12Q14500 433 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 FAM26FQ5R3K3 315 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 RINT1Q6NUQ1 792 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 HTR3DQ70Z44 454 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 BBS7Q8IWZ6 715 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 ITLN2Q8WWU7 325 aaPredicted RBP6.88□□□□□ -1.31
CSTF3-201ENST00000323959 STARD8Q92502 1023 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 TTYH3Q9C0H2 523 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 RSPH9Q9H1X1 276 aaPredicted RBP6.88□□□□□ -1.31
CSTF3-201ENST00000323959 BLZF1Q9H2G9 400 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 PANK4Q9NVE7 773 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 SMPD4Q9NXE4 827 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 IFNKQ9P0W0 207 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 TUBGCP4Q9UGJ1 667 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 NSD1Q96L73 2696 aaPredicted RBP6.88□□□□□ -1.31
CSTF3-201ENST00000323959 GTPBP10A4D1E9 387 aaKnown RBP6.88□□□□□ -1.31
CSTF3-201ENST00000323959 KIF2AO00139 706 aaPredicted RBP6.88□□□□□ -1.31
CSTF3-201ENST00000323959 SPRY1O43609 319 aaPredicted RBP6.88□□□□□ -1.31
CSTF3-201ENST00000323959 SNRPB2P08579 225 aaKnown RBP6.88□□□□□ -1.31
CSTF3-201ENST00000323959 INHBBP09529 407 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 MAP7Q14244 749 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 STXBP4Q6ZWJ1 553 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 LRRTM3Q86VH5 581 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 TMEM139Q8IV31 216 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 ADGRF2Q8IZF7 708 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 ERCC4Q92889 916 aaPredicted RBP6.88□□□□□ -1.31
CSTF3-201ENST00000323959 TSG101Q99816 390 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 RNF38Q9H0F5 515 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 MYO6Q9UM54 1294 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 CTNND2Q9UQB3 1225 aa6.88□□□□□ -1.31
CSTF3-201ENST00000323959 MASP2O00187 686 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 ATP2C2O75185 946 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 STSP08842 583 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 ITIH1P19827 911 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 MSNP26038 577 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms