RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 FBXO32Q969P5 355 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 AZIN2Q96A70 460 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 TSGA13Q96PP4 275 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 IL22Q9GZX6 179 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 CRISPLD1Q9H336 500 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 TRIM33Q9UPN9 1127 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 PHF24Q9UPV7 400 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 TLR6Q9Y2C9 796 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 C2CD2LO14523 706 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 MATN3O15232 486 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 NEBLO76041 1014 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 USP1O94782 785 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 COL6A1P12109 1028 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 GP5P40197 560 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 CDK7P50613 346 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 PAPOLAP51003 745 aaKnown RBP7.72□□□□□ -1.17
IFT88-201ENST00000319980 CCDC15Q0P6D6 951 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 BST1Q10588 318 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 TAF10Q12962 218 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 DUSP4Q13115 394 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 MRPL58Q14197 206 aaKnown RBP7.72□□□□□ -1.17
IFT88-201ENST00000319980 RTP2Q5QGT7 225 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 ARTNQ5T4W7 220 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 FUT10Q6P4F1 479 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 STRA8Q7Z7C7 330 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 MTDHQ86UE4 582 aaKnown RBP7.72□□□□□ -1.17
IFT88-201ENST00000319980 RTL3Q8N8U3 475 aaKnown RBP7.72□□□□□ -1.17
IFT88-201ENST00000319980 SEPT8Q92599 483 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 E2F7Q96AV8 911 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 SCLYQ96I15 445 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 ELAC1Q9H777 363 aaKnown RBP7.72□□□□□ -1.17
IFT88-201ENST00000319980 ZNF395Q9H8N7 513 aaPredicted RBP7.72□□□□□ -1.17
IFT88-201ENST00000319980 C20orf96Q9NUD7 363 aaPredicted RBP7.72□□□□□ -1.17
IFT88-201ENST00000319980 RBM22Q9NW64 420 aaKnown RBP eCLIP7.72□□□□□ -1.17
IFT88-201ENST00000319980 MARCH5Q9NX47 278 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 MKS1Q9NXB0 559 aa7.72□□□□□ -1.17
IFT88-201ENST00000319980 AAR2Q9Y312 384 aaKnown RBP7.72□□□□□ -1.17
IFT88-201ENST00000319980 MAGEB16A2A368 324 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 UNC5CO95185 931 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 HMBSP08397 361 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 SLC2A3P11169 496 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 TARSP26639 723 aaKnown RBP7.71□□□□□ -1.17
IFT88-201ENST00000319980 NMBRP28336 390 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 HTR7P34969 479 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 GMPRP36959 345 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 ABCG1P45844 678 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 NPY2RP49146 381 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 NUMBP49757 651 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 CCL23P55773 120 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 TCTN1Q2MV58 587 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 C10orf120Q5SQS8 335 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 ZNF449Q6P9G9 518 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 RNF19BQ6ZMZ0 732 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 ZCCHC23Q6ZST2 131 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 CMC1Q7Z7K0 106 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 ARHGAP18Q8N392 663 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 SLC39A13Q96H72 371 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 C1orf74Q96LT6 269 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 CPNE1Q99829 537 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 MFRPQ9BY79 579 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.71□□□□□ -1.17
IFT88-201ENST00000319980 ATXN3LQ9H3M9 355 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 SIRPGQ9P1W8 387 aa7.71□□□□□ -1.17
IFT88-201ENST00000319980 IPO11Q9UI26 975 aaKnown RBP7.71□□□□□ -1.17
IFT88-201ENST00000319980 ZNF638Q14966 1978 aaKnown RBP7.71□□□□□ -1.18
IFT88-201ENST00000319980 FAM237BA0A1B0GVD1 139 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 MTMR11A4FU01 709 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 C2orf71A6NGG8 1288 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 OR6C75A6NL08 312 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 TBKBP1A7MCY6 615 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 KLF11O14901 512 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 FKTNO75072 461 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 PMPCBO75439 489 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 GALTP07902 379 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 DLDP09622 509 aaKnown RBP7.71□□□□□ -1.18
IFT88-201ENST00000319980 FGFR3P22607 806 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 MAGEA11P43364 429 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 ARFIP2P53365 341 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 ATN1P54259 1190 aaPredicted RBP7.71□□□□□ -1.18
IFT88-201ENST00000319980 NAB1Q13506 487 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 POU6F1Q14863 301 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 TAF1BQ53T94 588 aaPredicted RBP7.71□□□□□ -1.18
IFT88-201ENST00000319980 MS4A13Q5J8X5 152 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 TEDDM1Q5T9Z0 273 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 N4BP2L1Q5TBK1 243 aaPredicted RBP7.71□□□□□ -1.18
IFT88-201ENST00000319980 GRTP1Q5TC63 336 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 CES4AQ5XG92 561 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 ATG16L1Q676U5 607 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 FSTL4Q6MZW2 842 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 TAS1R1Q7RTX1 841 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 LINC00523Q86TU6 105 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 KCNMB4Q86W47 210 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 ZNF354CQ86Y25 554 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 ACMSDQ8TDX5 336 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 FCRL5Q96RD9 977 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 GLOD4Q9HC38 313 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 MARCH2Q9P0N8 246 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 TRIM17Q9Y577 477 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 NUMBLQ9Y6R0 609 aa7.71□□□□□ -1.18
IFT88-201ENST00000319980 LAMA2P24043 3122 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms