RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 EPB41L1Q9H4G0 881 aa15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 CYP4F11Q9HBI6 524 aa15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 KLHL8Q9P2G9 620 aaPredicted RBP15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 FZD10Q9ULW2 581 aa15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 SOX13Q9UN79 622 aa15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 HEMK1Q9Y5R4 338 aaPredicted RBP15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 TTC3P53804 2025 aa15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 XPO1O14980 1071 aaKnown RBP15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 B3GAT3O94766 335 aa15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 IL1BP01584 269 aa15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 ERVK-10P10266 1014 aa15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 PNPLA4P41247 253 aa15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 BRCC3P46736 316 aa15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 PGGT1BP53609 377 aa15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 TCHHL1Q5QJ38 904 aaPredicted RBP15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 MORN1Q5T089 497 aa15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 OTUD1Q5VV17 481 aaPredicted RBP15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 E2F7Q96AV8 911 aa15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 EBNA1BP2Q99848 306 aaKnown RBP15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 ARHGAP39Q9C0H5 1083 aa15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 GDAP2Q9NXN4 497 aa15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 PSAT1Q9Y617 370 aa15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 I6L893 689 aaPredicted RBP15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 KLF11O14901 512 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 CCDC166P0CW27 439 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 RAG1P15918 1043 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 ACADSBP45954 432 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 ADAM17P78536 824 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 PURAQ00577 322 aaKnown RBP15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 PLOD1Q02809 727 aaPredicted RBP15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 GRAMD1BQ3KR37 738 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 TEX44Q53QW1 395 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 KDELC2Q7Z4H8 507 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 HSFY1Q96LI6 401 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 RBM38Q9H0Z9 239 aaKnown RBP15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 SLC45A1Q9Y2W3 748 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 TPH1P17752 444 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 SAT1P21673 171 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 ADARP55265 1226 aaKnown RBP15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 TRIM32Q13049 653 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 TMED1Q13445 227 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 GDF6Q6KF10 455 aaPredicted RBP15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 DNAAF3Q8N9W5 541 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 CENPIQ92674 756 aaPredicted RBP15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 C7orf26Q96N11 449 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 QKIQ96PU8 341 aaKnown RBP eCLIP15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 C11orf84Q9BUA3 381 aaPredicted RBP15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 WWP1Q9H0M0 922 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 C1orf21Q9H246 121 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 AGO3Q9H9G7 860 aaKnown RBP15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 ACSS2Q9NR19 701 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 FAM105AQ9NUU6 356 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 LZTS1Q9Y250 596 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 CLPTM1O96005 669 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 PROCP04070 461 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 THP07101 528 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 KCNE1P15382 129 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 BDNFP23560 247 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 SERPINB6P35237 376 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 CDC42EP1Q00587 391 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 BTKQ06187 659 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 DBN1Q16643 649 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 TMEM259Q4ZIN3 620 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 RWDD4Q6NW29 188 aaKnown RBP15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 HPS6Q86YV9 775 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 PPP1R14CQ8TAE6 165 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 RIN3Q8TB24 985 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 GAB3Q8WWW8 586 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 NMRK2Q9NPI5 230 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 PACSIN3Q9UKS6 424 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 PLLPQ9Y342 182 aa15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 ZNF638Q14966 1978 aaKnown RBP15.87■□□□□ 0.13
SHROOM1-201ENST00000319854 A0A0A0MRY4 1105 aa15.86■□□□□ 0.13
SHROOM1-201ENST00000319854 SDR42E2A6NKP2 422 aa15.86■□□□□ 0.13
SHROOM1-201ENST00000319854 H3BNX3 289 aa15.86■□□□□ 0.13
SHROOM1-201ENST00000319854 ERCC2P18074 760 aa15.86■□□□□ 0.13
SHROOM1-201ENST00000319854 THPOP40225 353 aa15.86■□□□□ 0.13
SHROOM1-201ENST00000319854 ITGA9Q13797 1035 aa15.86■□□□□ 0.13
SHROOM1-201ENST00000319854 PPM1JQ5JR12 505 aa15.86■□□□□ 0.13
SHROOM1-201ENST00000319854 OR52K1Q8NGK4 314 aa15.86■□□□□ 0.13
SHROOM1-201ENST00000319854 GSDMBQ8TAX9 411 aa15.86■□□□□ 0.13
SHROOM1-201ENST00000319854 SPATA13Q96N96 652 aa15.86■□□□□ 0.13
SHROOM1-201ENST00000319854 HNRNPABQ99729 332 aaKnown RBP15.86■□□□□ 0.13
SHROOM1-201ENST00000319854 SMOQ99835 787 aa15.86■□□□□ 0.13
SHROOM1-201ENST00000319854 SYBUQ9NX95 663 aa15.86■□□□□ 0.13
SHROOM1-201ENST00000319854 STAP1Q9ULZ2 295 aa15.86■□□□□ 0.13
SHROOM1-201ENST00000319854 ARL5CA6NH57 179 aa15.86■□□□□ 0.13
SHROOM1-201ENST00000319854 GCATO75600 419 aa15.86■□□□□ 0.13
SHROOM1-201ENST00000319854 ZFXP17010 805 aaPredicted RBP15.86■□□□□ 0.13
SHROOM1-201ENST00000319854 PMLP29590 882 aa15.86■□□□□ 0.13
SHROOM1-201ENST00000319854 CD52P31358 61 aa15.86■□□□□ 0.13
SHROOM1-201ENST00000319854 RPL5P46777 297 aaKnown RBP15.86■□□□□ 0.13
SHROOM1-201ENST00000319854 ZNF567Q8N184 647 aa15.86■□□□□ 0.13
SHROOM1-201ENST00000319854 HBS1LQ9Y450 684 aaKnown RBP15.86■□□□□ 0.13
SHROOM1-201ENST00000319854 PDE4DIPQ5VU43 2346 aa15.86■□□□□ 0.13
SHROOM1-201ENST00000319854 HMX2A2RU54 273 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 AP1G1O43747 822 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 RFPL1O75677 317 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 FYNP06241 537 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms