RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 OR8D1Q8WZ84 308 aa14.63□□□□□ -0.07
RPP40-201ENST00000319533 CRELD1Q96HD1 420 aa14.63□□□□□ -0.07
RPP40-201ENST00000319533 FAM81BQ96LP2 452 aa14.63□□□□□ -0.07
RPP40-201ENST00000319533 FEM1AQ9BSK4 669 aa14.63□□□□□ -0.07
RPP40-201ENST00000319533 NUP62CLQ9H1M0 184 aa14.63□□□□□ -0.07
RPP40-201ENST00000319533 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.63□□□□□ -0.07
RPP40-201ENST00000319533 BECN2A8MW95 431 aa14.62□□□□□ -0.07
RPP40-201ENST00000319533 THAP12O43422 761 aa14.62□□□□□ -0.07
RPP40-201ENST00000319533 TLX3O43711 291 aaPredicted RBP14.62□□□□□ -0.07
RPP40-201ENST00000319533 RNGTTO60942 597 aaKnown RBP14.62□□□□□ -0.07
RPP40-201ENST00000319533 CKMT2P17540 419 aa14.62□□□□□ -0.07
RPP40-201ENST00000319533 ACP1P24666 158 aa14.62□□□□□ -0.07
RPP40-201ENST00000319533 ABCG1P45844 678 aa14.62□□□□□ -0.07
RPP40-201ENST00000319533 CNTN1Q12860 1018 aa14.62□□□□□ -0.07
RPP40-201ENST00000319533 AUHQ13825 339 aaKnown RBP14.62□□□□□ -0.07
RPP40-201ENST00000319533 DLG2Q15700 870 aa14.62□□□□□ -0.07
RPP40-201ENST00000319533 PROX2Q3B8N5 592 aa14.62□□□□□ -0.07
RPP40-201ENST00000319533 EFHC1Q5JVL4 640 aa14.62□□□□□ -0.07
RPP40-201ENST00000319533 MLKLQ8NB16 471 aa14.62□□□□□ -0.07
RPP40-201ENST00000319533 CPXM1Q96SM3 734 aa14.62□□□□□ -0.07
RPP40-201ENST00000319533 SRRTQ9BXP5 876 aaKnown RBP14.62□□□□□ -0.07
RPP40-201ENST00000319533 FAM204AQ9H8W3 233 aa14.62□□□□□ -0.07
RPP40-201ENST00000319533 ACP6Q9NPH0 428 aa14.62□□□□□ -0.07
RPP40-201ENST00000319533 DDIT4Q9NX09 232 aa14.62□□□□□ -0.07
RPP40-201ENST00000319533 RWDD2AQ9UIY3 292 aa14.62□□□□□ -0.07
RPP40-201ENST00000319533 PCDHGC3Q9UN70 934 aa14.62□□□□□ -0.07
RPP40-201ENST00000319533 TBC1D30Q9Y2I9 924 aa14.62□□□□□ -0.07
RPP40-201ENST00000319533 PRAMEF26H0Y7S4 382 aa14.61□□□□□ -0.07
RPP40-201ENST00000319533 HSF2BPO75031 334 aa14.61□□□□□ -0.07
RPP40-201ENST00000319533 CLDN11O75508 207 aa14.61□□□□□ -0.07
RPP40-201ENST00000319533 IRAK1P51617 712 aa14.61□□□□□ -0.07
RPP40-201ENST00000319533 TAS2R38P59533 333 aa14.61□□□□□ -0.07
RPP40-201ENST00000319533 SETMARQ53H47 684 aaPredicted RBP14.61□□□□□ -0.07
RPP40-201ENST00000319533 NEK5Q6P3R8 708 aa14.61□□□□□ -0.07
RPP40-201ENST00000319533 SH2D3CQ8N5H7 860 aa14.61□□□□□ -0.07
RPP40-201ENST00000319533 TMEM145Q8NBT3 493 aa14.61□□□□□ -0.07
RPP40-201ENST00000319533 SNIP1Q8TAD8 396 aaKnown RBP14.61□□□□□ -0.07
RPP40-201ENST00000319533 PIP4K2CQ8TBX8 421 aa14.61□□□□□ -0.07
RPP40-201ENST00000319533 PPP1R13BQ96KQ4 1090 aa14.61□□□□□ -0.07
RPP40-201ENST00000319533 RPRD1AQ96P16 312 aaPredicted RBP14.61□□□□□ -0.07
RPP40-201ENST00000319533 UBL7Q96S82 380 aaPredicted RBP14.61□□□□□ -0.07
RPP40-201ENST00000319533 PRORYQ9H606 182 aa14.61□□□□□ -0.07
RPP40-201ENST00000319533 PREBQ9HCU5 417 aa14.61□□□□□ -0.07
RPP40-201ENST00000319533 LMBRD1Q9NUN5 540 aa14.61□□□□□ -0.07
RPP40-201ENST00000319533 DACH1Q9UI36 760 aa14.61□□□□□ -0.07
RPP40-201ENST00000319533 SLC25A13Q9UJS0 675 aa14.61□□□□□ -0.07
RPP40-201ENST00000319533 HS3ST2Q9Y278 367 aa14.61□□□□□ -0.07
RPP40-201ENST00000319533 PTPRQQ9UMZ3 2332 aa14.61□□□□□ -0.07
RPP40-201ENST00000319533 HELZ2Q9BYK8 2649 aaKnown RBP14.61□□□□□ -0.07
RPP40-201ENST00000319533 MYLKQ15746 1914 aa14.6□□□□□ -0.07
RPP40-201ENST00000319533 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.6□□□□□ -0.07
RPP40-201ENST00000319533 C1QTNF3-AMACRE9PGA6 284 aa14.6□□□□□ -0.07
RPP40-201ENST00000319533 ITPKBP27987 946 aa14.6□□□□□ -0.07
RPP40-201ENST00000319533 MAT2AP31153 395 aaKnown RBP14.6□□□□□ -0.07
RPP40-201ENST00000319533 CENPCQ03188 943 aa14.6□□□□□ -0.07
RPP40-201ENST00000319533 ZNF177Q13360 481 aaPredicted RBP14.6□□□□□ -0.07
RPP40-201ENST00000319533 ZNF211Q13398 564 aaPredicted RBP14.6□□□□□ -0.07
RPP40-201ENST00000319533 STAT4Q14765 748 aa14.6□□□□□ -0.07
RPP40-201ENST00000319533 TPD52L1Q16890 204 aaPredicted RBP14.6□□□□□ -0.07
RPP40-201ENST00000319533 PIP5KL1Q5T9C9 394 aa14.6□□□□□ -0.07
RPP40-201ENST00000319533 TRIM65Q6PJ69 517 aa14.6□□□□□ -0.07
RPP40-201ENST00000319533 OLFML1Q6UWY5 402 aa14.6□□□□□ -0.07
RPP40-201ENST00000319533 Q6ZVU0 165 aa14.6□□□□□ -0.07
RPP40-201ENST00000319533 SLC25A45Q8N413 288 aa14.6□□□□□ -0.07
RPP40-201ENST00000319533 DCBLD1Q8N8Z6 715 aa14.6□□□□□ -0.07
RPP40-201ENST00000319533 SHC3Q92529 594 aa14.6□□□□□ -0.07
RPP40-201ENST00000319533 VANGL2Q9ULK5 521 aa14.6□□□□□ -0.07
RPP40-201ENST00000319533 HS3ST4Q9Y661 456 aa14.6□□□□□ -0.07
RPP40-201ENST00000319533 DOCK9Q9BZ29 2069 aa14.6□□□□□ -0.07
RPP40-201ENST00000319533 BPTFQ12830 3046 aa14.6□□□□□ -0.07
RPP40-201ENST00000319533 TK2O00142 265 aa14.59□□□□□ -0.07
RPP40-201ENST00000319533 TRIM38O00635 465 aa14.59□□□□□ -0.07
RPP40-201ENST00000319533 CTSLP07711 333 aa14.59□□□□□ -0.07
RPP40-201ENST00000319533 SRCP12931 536 aa14.59□□□□□ -0.07
RPP40-201ENST00000319533 NUMBP49757 651 aa14.59□□□□□ -0.07
RPP40-201ENST00000319533 CDH4P55283 916 aa14.59□□□□□ -0.07
RPP40-201ENST00000319533 INSM1Q01101 510 aaPredicted RBP14.59□□□□□ -0.07
RPP40-201ENST00000319533 ACCSLQ4AC99 568 aa14.59□□□□□ -0.07
RPP40-201ENST00000319533 OTUD1Q5VV17 481 aaPredicted RBP14.59□□□□□ -0.07
RPP40-201ENST00000319533 GJB7Q6PEY0 223 aa14.59□□□□□ -0.07
RPP40-201ENST00000319533 C11orf57Q6ZUT1 292 aaPredicted RBP14.59□□□□□ -0.07
RPP40-201ENST00000319533 SLC26A9Q7LBE3 791 aa14.59□□□□□ -0.07
RPP40-201ENST00000319533 C14orf80Q86SX3 495 aa14.59□□□□□ -0.07
RPP40-201ENST00000319533 CREBRFQ8IUR6 639 aa14.59□□□□□ -0.07
RPP40-201ENST00000319533 ZNF683Q8IZ20 524 aa14.59□□□□□ -0.07
RPP40-201ENST00000319533 ZNF397Q8NF99 534 aaPredicted RBP14.59□□□□□ -0.07
RPP40-201ENST00000319533 RNF34Q969K3 372 aa14.59□□□□□ -0.07
RPP40-201ENST00000319533 KLHDC7BQ96G42 594 aa14.59□□□□□ -0.07
RPP40-201ENST00000319533 DCBLD2Q96PD2 775 aa14.59□□□□□ -0.07
RPP40-201ENST00000319533 KLHL11Q9NVR0 708 aa14.59□□□□□ -0.07
RPP40-201ENST00000319533 VPS28Q9UK41 221 aa14.59□□□□□ -0.07
RPP40-201ENST00000319533 AK5Q9Y6K8 562 aa14.59□□□□□ -0.07
RPP40-201ENST00000319533 GTPBP10A4D1E9 387 aaKnown RBP14.58□□□□□ -0.08
RPP40-201ENST00000319533 SIGLEC6O43699 453 aa14.58□□□□□ -0.08
RPP40-201ENST00000319533 KALRNO60229 2985 aa14.58□□□□□ -0.08
RPP40-201ENST00000319533 PAGE1O75459 146 aa14.58□□□□□ -0.08
RPP40-201ENST00000319533 DAB1O75553 588 aa14.58□□□□□ -0.08
RPP40-201ENST00000319533 GIMD1P0DJR0 217 aa14.58□□□□□ -0.08
RPP40-201ENST00000319533 SLC9A1P19634 815 aa14.58□□□□□ -0.08
RPP40-201ENST00000319533 NOS2P35228 1153 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms