RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 C11orf63Q6NUN7 778 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 LCLAT1Q6UWP7 414 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 RNF19BQ6ZMZ0 732 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 ZNF438Q7Z4V0 828 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 COLGALT2Q8IYK4 626 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 GPR135Q8IZ08 494 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 MYLIPQ8WY64 445 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 RUBCNLQ9H714 662 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.46□□□□□ -0.25
NBPF3-201ENST00000318220 HCN4Q9Y3Q4 1203 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 L3MBTL1Q9Y468 752 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 CACNA1EQ15878 2313 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 TRIM49D1C9J1S8 452 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 ADSSP30520 456 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 CRADDP78560 199 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 CREB5Q02930 508 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 USP4Q13107 963 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 MPP3Q13368 585 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 ITPRIPL2Q3MIP1 535 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 PLA2G4EQ3MJ16 856 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 RFX8Q6ZV50 586 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 STRA8Q7Z7C7 330 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 TAC4Q86UU9 113 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 TDHQ8IZJ6 230 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 KREMEN1Q96MU8 473 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 OXCT2Q9BYC2 517 aaPredicted RBP13.46□□□□□ -0.25
NBPF3-201ENST00000318220 TPSD1Q9BZJ3 242 aa13.46□□□□□ -0.25
NBPF3-201ENST00000318220 ATG13O75143 517 aa13.46□□□□□ -0.26
NBPF3-201ENST00000318220 C4BPAP04003 597 aaKnown RBP13.46□□□□□ -0.26
NBPF3-201ENST00000318220 RB1P06400 928 aa13.46□□□□□ -0.26
NBPF3-201ENST00000318220 NFKB1P19838 968 aa13.46□□□□□ -0.26
NBPF3-201ENST00000318220 NOMO3P69849 1222 aa13.46□□□□□ -0.26
NBPF3-201ENST00000318220 GPR17Q13304 367 aa13.46□□□□□ -0.26
NBPF3-201ENST00000318220 USP39Q53GS9 565 aaKnown RBP13.46□□□□□ -0.26
NBPF3-201ENST00000318220 HYIQ5T013 277 aa13.46□□□□□ -0.26
NBPF3-201ENST00000318220 CNSTQ6PJW8 725 aa13.46□□□□□ -0.26
NBPF3-201ENST00000318220 C2orf73Q8N5S3 287 aaPredicted RBP13.46□□□□□ -0.26
NBPF3-201ENST00000318220 CAMKK1Q8N5S9 505 aa13.46□□□□□ -0.26
NBPF3-201ENST00000318220 MCOLN3Q8TDD5 553 aa13.46□□□□□ -0.26
NBPF3-201ENST00000318220 SPDL1Q96EA4 605 aa13.46□□□□□ -0.26
NBPF3-201ENST00000318220 DNAJC28Q9NX36 388 aa13.46□□□□□ -0.26
NBPF3-201ENST00000318220 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.46□□□□□ -0.26
NBPF3-201ENST00000318220 PCCBP05166 539 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 KRT4P19013 534 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 ALDH4A1P30038 563 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 TMCO4Q5TGY1 634 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 PRSS58Q8IYP2 241 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 FAM71AQ8IYT1 594 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 TSPAN18Q96SJ8 248 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 PTPRHQ9HD43 1115 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 TMPRSS4Q9NRS4 437 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 DZANK1Q9NVP4 752 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 BCAP29Q9UHQ4 241 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 CD207Q9UJ71 328 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 ERVW-1Q9UQF0 538 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 KATNA1O75449 491 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 VIPP01282 170 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 ADH5P11766 374 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 MGAT1P26572 445 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 RAD23BP54727 409 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 MAMLD1Q13495 774 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 CCINQ13939 588 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 FAM151BQ6UXP7 276 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 TPRG1Q6ZUI0 275 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 NMUR1Q9HB89 426 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 CD84Q9UIB8 345 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 GNEQ9Y223 722 aaKnown RBP13.45□□□□□ -0.26
NBPF3-201ENST00000318220 KANSL1LA0AUZ9 987 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 MTMR11A4FU01 709 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 C5orf58C9J3I9 102 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 RAD51CO43502 376 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 CCNT2O60583 730 aaKnown RBP13.45□□□□□ -0.26
NBPF3-201ENST00000318220 STMN1P16949 149 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 ATP4AP20648 1035 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 PSMB4P28070 264 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 AUHQ13825 339 aaKnown RBP13.45□□□□□ -0.26
NBPF3-201ENST00000318220 LEMD2Q8NC56 503 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 HNRNPABQ99729 332 aaKnown RBP13.45□□□□□ -0.26
NBPF3-201ENST00000318220 NTPCRQ9BSD7 190 aaKnown RBP13.45□□□□□ -0.26
NBPF3-201ENST00000318220 SFXN1Q9H9B4 322 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 SIRPGQ9P1W8 387 aa13.45□□□□□ -0.26
NBPF3-201ENST00000318220 CITO14578 2027 aa13.44□□□□□ -0.26
NBPF3-201ENST00000318220 GRID2IPA4D2P6 1211 aa13.44□□□□□ -0.26
NBPF3-201ENST00000318220 ZSCAN9O15535 394 aaPredicted RBP13.44□□□□□ -0.26
NBPF3-201ENST00000318220 CATP04040 527 aaKnown RBP13.44□□□□□ -0.26
NBPF3-201ENST00000318220 PYGMP11217 842 aa13.44□□□□□ -0.26
NBPF3-201ENST00000318220 PABPC1P11940 636 aaKnown RBP13.44□□□□□ -0.26
NBPF3-201ENST00000318220 FNTAP49354 379 aa13.44□□□□□ -0.26
NBPF3-201ENST00000318220 BRMS1LQ5PSV4 323 aa13.44□□□□□ -0.26
NBPF3-201ENST00000318220 RTP2Q5QGT7 225 aa13.44□□□□□ -0.26
NBPF3-201ENST00000318220 FBXO36Q8NEA4 188 aa13.44□□□□□ -0.26
NBPF3-201ENST00000318220 COL26A1Q96A83 441 aa13.44□□□□□ -0.26
NBPF3-201ENST00000318220 ACDQ96AP0 544 aa13.44□□□□□ -0.26
NBPF3-201ENST00000318220 FBXL12Q9NXK8 326 aa13.44□□□□□ -0.26
NBPF3-201ENST00000318220 HCSTQ9UBK5 93 aa13.44□□□□□ -0.26
NBPF3-201ENST00000318220 E2F6O75461 281 aa13.44□□□□□ -0.26
NBPF3-201ENST00000318220 SERPINH1P50454 418 aaKnown RBP13.44□□□□□ -0.26
NBPF3-201ENST00000318220 FMO1Q01740 532 aa13.44□□□□□ -0.26
NBPF3-201ENST00000318220 ABRQ12979 859 aa13.44□□□□□ -0.26
NBPF3-201ENST00000318220 CASP8Q14790 479 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms