RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 NMT1P30419 496 aaKnown RBP6.78□□□□□ -1.32
ZNF540-201ENST00000316433 PTGER2P43116 358 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 RACK1P63244 317 aaKnown RBP6.78□□□□□ -1.32
ZNF540-201ENST00000316433 TRAF2Q12933 501 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 SP140Q13342 867 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 NAB1Q13506 487 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 TRPC3Q13507 836 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 MAPRE1Q15691 268 aaKnown RBP6.78□□□□□ -1.32
ZNF540-201ENST00000316433 CEP55Q53EZ4 464 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 SH2D5Q6ZV89 423 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 FAM83AQ86UY5 434 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 KBTBD6Q86V97 674 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 GLYCTKQ8IVS8 523 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 HERC6Q8IVU3 1022 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 SEPT12Q8IYM1 358 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 RCOR2Q8IZ40 523 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 C4orf33Q8N1A6 199 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 KIAA1958Q8N8K9 716 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 GALNT11Q8NCW6 608 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 ADCY4Q8NFM4 1077 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 OR5H6Q8NGV6 325 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 HDAC2Q92769 488 aaKnown RBP6.78□□□□□ -1.32
ZNF540-201ENST00000316433 HEXIM2Q96MH2 286 aaKnown RBP6.78□□□□□ -1.32
ZNF540-201ENST00000316433 SNX18Q96RF0 628 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 CITED4Q96RK1 184 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 SECISBP2Q96T21 854 aaKnown RBP6.78□□□□□ -1.32
ZNF540-201ENST00000316433 USB1Q9BQ65 265 aaKnown RBP6.78□□□□□ -1.32
ZNF540-201ENST00000316433 C17orf62Q9BQA9 187 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 ZSCAN5AQ9BUG6 496 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 DPEP3Q9H4B8 488 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 CXorf21Q9HAI6 301 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 TRIM39Q9HCM9 518 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 TIGARQ9NQ88 270 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 SUCOQ9UBS9 1254 aaKnown RBP6.78□□□□□ -1.32
ZNF540-201ENST00000316433 PGAP2Q9UHJ9 254 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 FEM1BQ9UK73 627 aa6.78□□□□□ -1.32
ZNF540-201ENST00000316433 CPSF3Q9UKF6 684 aaKnown RBP6.78□□□□□ -1.32
ZNF540-201ENST00000316433 EIF3LQ9Y262 564 aaKnown RBP6.78□□□□□ -1.32
ZNF540-201ENST00000316433 BAZ2BQ9UIF8 2168 aaKnown RBP6.77□□□□□ -1.33
ZNF540-201ENST00000316433 A0A1W2PQ72 361 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 LRRC72A6NJI9 287 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 CLDN25C9JDP6 229 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 RNF103O00237 685 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 VWA5AO00534 786 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 PDPK1O15530 556 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 CLPXO76031 633 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 HLA-DRAP01903 254 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 TTKP33981 857 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 CPOXP36551 454 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 CASP4P49662 377 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 OAZ1P54368 228 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 EPHB1P54762 984 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 GPR85P60893 370 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 TXNL4AP83876 142 aaKnown RBP6.77□□□□□ -1.33
ZNF540-201ENST00000316433 OCA2Q04671 838 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 RAD51Q06609 339 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 ZNF33BQ06732 778 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 NFATC3Q12968 1075 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 STX3Q13277 289 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 CDK10Q15131 360 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 LEXMQ3ZCV2 418 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 BRDTQ58F21 947 aaPredicted RBP6.77□□□□□ -1.33
ZNF540-201ENST00000316433 CCNJQ5T5M9 372 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 GPR107Q5VW38 600 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 TRAF7Q6Q0C0 670 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 ADGRD1Q6QNK2 874 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 PLEKHG7Q6ZR37 379 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 RNF207Q6ZRF8 634 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 BEND5Q7L4P6 421 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 CCDC105Q8IYK2 499 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 MCOLN2Q8IZK6 566 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 FAM9CQ8IZT9 166 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 LINC00518Q8N0U6 118 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.77□□□□□ -1.33
ZNF540-201ENST00000316433 JPH3Q8WXH2 748 aaPredicted RBP6.77□□□□□ -1.33
ZNF540-201ENST00000316433 DCPSQ96C86 337 aaKnown RBP6.77□□□□□ -1.33
ZNF540-201ENST00000316433 ZBED3Q96IU2 234 aaPredicted RBP6.77□□□□□ -1.33
ZNF540-201ENST00000316433 PCDHB18PQ96TA0 734 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 TRIM15Q9C019 465 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 DHX33Q9H6R0 707 aaKnown RBP6.77□□□□□ -1.33
ZNF540-201ENST00000316433 MRPL47Q9HD33 250 aaKnown RBP6.77□□□□□ -1.33
ZNF540-201ENST00000316433 OSGEPQ9NPF4 335 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 PNPLA3Q9NST1 481 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 KCTD5Q9NXV2 234 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 CNTN3Q9P232 1028 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 POLLQ9UGP5 575 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 KIAA1217Q5T5P2 1943 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 A0A087WXM4 84 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 MEI4A8MW99 385 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 SLC22A2O15244 555 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 MAN1A2O60476 641 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 NOL3O60936 208 aaKnown RBP6.77□□□□□ -1.33
ZNF540-201ENST00000316433 NADKO95544 446 aaPredicted RBP6.77□□□□□ -1.33
ZNF540-201ENST00000316433 KRT8P05787 483 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 BMP3P12645 472 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 CYP11B1P15538 503 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 ZNF182P17025 639 aaPredicted RBP6.77□□□□□ -1.33
ZNF540-201ENST00000316433 EIF2AK2P19525 551 aaKnown RBP6.77□□□□□ -1.33
ZNF540-201ENST00000316433 ALAS2P22557 587 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 TSC2P49815 1807 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms