RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 BEST1O76090 585 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 ATP6V1B1P15313 513 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 RBL1P28749 1068 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 GRK4P32298 578 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 RPL26P61254 145 aaKnown RBP17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 N4BP2L1Q5TBK1 243 aaPredicted RBP17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 OGFRL1Q5TC84 451 aaPredicted RBP17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 KBTBD6Q86V97 674 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 MPP5Q8N3R9 675 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 METTL25Q8N6Q8 603 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 KLHL23Q8NBE8 558 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 CMTM5Q96DZ9 223 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 GRIP2Q9C0E4 1043 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 KLC2Q9H0B6 622 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 STN1Q9H668 368 aaKnown RBP17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 NRDE2Q9H7Z3 1164 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 UBAP1Q9NZ09 502 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 HESX1Q9UBX0 185 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 KIAA1257Q9ULG3 409 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 LZTS1Q9Y250 596 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 TRIM17Q9Y577 477 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 TFE3P19532 575 aaPredicted RBP17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 TMEM259Q4ZIN3 620 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 ATG14Q6ZNE5 492 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 RTN4RL1Q86UN2 441 aaPredicted RBP17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 PHTF2Q8N3S3 785 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 MARVELD2Q8N4S9 558 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 GSDMBQ8TAX9 411 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 PXYLP1Q8TE99 480 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 RXFP2Q8WXD0 754 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 SENP8Q96LD8 212 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 FRMD8Q9BZ67 464 aaPredicted RBP17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 STARD7Q9NQZ5 370 aa17.55■□□□□ 0.4
SCAMP4-201ENST00000316097 FAM159BA6NKW6 160 aa17.54■□□□□ 0.4
SCAMP4-201ENST00000316097 PAPSS1O43252 624 aaPredicted RBP17.54■□□□□ 0.4
SCAMP4-201ENST00000316097 ZBED1O96006 694 aa17.54■□□□□ 0.4
SCAMP4-201ENST00000316097 PDGFRAP16234 1089 aa17.54■□□□□ 0.4
SCAMP4-201ENST00000316097 PNPLA4P41247 253 aa17.54■□□□□ 0.4
SCAMP4-201ENST00000316097 HPCAP84074 193 aa17.54■□□□□ 0.4
SCAMP4-201ENST00000316097 UNC93AQ86WB7 457 aa17.54■□□□□ 0.4
SCAMP4-201ENST00000316097 REM2Q8IYK8 340 aaPredicted RBP17.54■□□□□ 0.4
SCAMP4-201ENST00000316097 EMCNQ9ULC0 261 aa17.54■□□□□ 0.4
SCAMP4-201ENST00000316097 FKTNO75072 461 aa17.54■□□□□ 0.4
SCAMP4-201ENST00000316097 LRPAP1P30533 357 aa17.54■□□□□ 0.4
SCAMP4-201ENST00000316097 CNGA3Q16281 694 aa17.54■□□□□ 0.4
SCAMP4-201ENST00000316097 PPP4R1Q8TF05 950 aa17.54■□□□□ 0.4
SCAMP4-201ENST00000316097 KHSRPQ92945 711 aaKnown RBP eCLIP17.54■□□□□ 0.4
SCAMP4-201ENST00000316097 CFHR5Q9BXR6 569 aa17.54■□□□□ 0.4
SCAMP4-201ENST00000316097 SLC17A6Q9P2U8 582 aa17.54■□□□□ 0.4
SCAMP4-201ENST00000316097 APPL1Q9UKG1 709 aa17.54■□□□□ 0.4
SCAMP4-201ENST00000316097 RALGAPA2Q2PPJ7 1873 aa17.53■□□□□ 0.4
SCAMP4-201ENST00000316097 A0A0U1RQF3 1178 aa17.53■□□□□ 0.4
SCAMP4-201ENST00000316097 MYOCOSA0A1B0GUC4 107 aa17.53■□□□□ 0.4
SCAMP4-201ENST00000316097 DCXO43602 365 aa17.53■□□□□ 0.4
SCAMP4-201ENST00000316097 DNAJA2O60884 412 aa17.53■□□□□ 0.4
SCAMP4-201ENST00000316097 BRCC3P46736 316 aa17.53■□□□□ 0.4
SCAMP4-201ENST00000316097 SERPINB9P50453 376 aa17.53■□□□□ 0.4
SCAMP4-201ENST00000316097 TFDP2Q14188 446 aa17.53■□□□□ 0.4
SCAMP4-201ENST00000316097 CRYBG2Q8N1P7 616 aa17.53■□□□□ 0.4
SCAMP4-201ENST00000316097 PQLC1Q8N2U9 271 aa17.53■□□□□ 0.4
SCAMP4-201ENST00000316097 TTC39CQ8N584 583 aa17.53■□□□□ 0.4
SCAMP4-201ENST00000316097 B3GALNT2Q8NCR0 500 aa17.53■□□□□ 0.4
SCAMP4-201ENST00000316097 PCDH10Q9P2E7 1040 aa17.53■□□□□ 0.4
SCAMP4-201ENST00000316097 ITGB1P05556 798 aa17.53■□□□□ 0.4
SCAMP4-201ENST00000316097 MTTPP55157 894 aa17.53■□□□□ 0.4
SCAMP4-201ENST00000316097 DSC3Q14574 896 aa17.53■□□□□ 0.4
SCAMP4-201ENST00000316097 UNC5BQ8IZJ1 945 aa17.53■□□□□ 0.4
SCAMP4-201ENST00000316097 CNBD2Q96M20 576 aa17.53■□□□□ 0.4
SCAMP4-201ENST00000316097 MAGEB5Q9BZ81 275 aa17.53■□□□□ 0.4
SCAMP4-201ENST00000316097 SSX2IPQ9Y2D8 614 aa17.53■□□□□ 0.4
SCAMP4-201ENST00000316097 CASP8AP2Q9UKL3 1982 aa17.52■□□□□ 0.4
SCAMP4-201ENST00000316097 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.52■□□□□ 0.4
SCAMP4-201ENST00000316097 DENRO43583 198 aaKnown RBP17.52■□□□□ 0.4
SCAMP4-201ENST00000316097 B3GAT3O94766 335 aa17.52■□□□□ 0.4
SCAMP4-201ENST00000316097 ATXN1P54253 815 aaKnown RBP17.52■□□□□ 0.4
SCAMP4-201ENST00000316097 PCLAFQ15004 111 aa17.52■□□□□ 0.4
SCAMP4-201ENST00000316097 TIGD5Q53EQ6 642 aa17.52■□□□□ 0.4
SCAMP4-201ENST00000316097 SCYL2Q6P3W7 929 aa17.52■□□□□ 0.4
SCAMP4-201ENST00000316097 OLFML1Q6UWY5 402 aa17.52■□□□□ 0.4
SCAMP4-201ENST00000316097 C10orf107Q8IVU9 208 aa17.52■□□□□ 0.4
SCAMP4-201ENST00000316097 ZFP28Q8NHY6 868 aa17.52■□□□□ 0.4
SCAMP4-201ENST00000316097 SIGLEC10Q96LC7 697 aa17.52■□□□□ 0.4
SCAMP4-201ENST00000316097 SORT1Q99523 831 aa17.52■□□□□ 0.4
SCAMP4-201ENST00000316097 SLC4A5Q9BY07 1137 aa17.52■□□□□ 0.4
SCAMP4-201ENST00000316097 RHOBTB2Q9BYZ6 727 aa17.52■□□□□ 0.4
SCAMP4-201ENST00000316097 Q9H521 79 aa17.52■□□□□ 0.4
SCAMP4-201ENST00000316097 DNAJC28Q9NX36 388 aa17.52■□□□□ 0.4
SCAMP4-201ENST00000316097 PSMD13Q9UNM6 376 aa17.52■□□□□ 0.4
SCAMP4-201ENST00000316097 SERPINE1P05121 402 aa17.52■□□□□ 0.39
SCAMP4-201ENST00000316097 COX4I1P13073 169 aa17.52■□□□□ 0.39
SCAMP4-201ENST00000316097 ARRB2P32121 409 aa17.52■□□□□ 0.39
SCAMP4-201ENST00000316097 GK3PQ14409 553 aa17.52■□□□□ 0.39
SCAMP4-201ENST00000316097 MYLK3Q32MK0 819 aa17.52■□□□□ 0.39
SCAMP4-201ENST00000316097 TRAF7Q6Q0C0 670 aa17.52■□□□□ 0.39
SCAMP4-201ENST00000316097 PAQR9Q6ZVX9 377 aa17.52■□□□□ 0.39
SCAMP4-201ENST00000316097 LIMS2Q7Z4I7 341 aa17.52■□□□□ 0.39
SCAMP4-201ENST00000316097 CTU1Q7Z7A3 348 aaKnown RBP17.52■□□□□ 0.39
SCAMP4-201ENST00000316097 PLD5Q8N7P1 536 aa17.52■□□□□ 0.39
SCAMP4-201ENST00000316097 ANKRD52Q8NB46 1076 aa17.52■□□□□ 0.39
SCAMP4-201ENST00000316097 RNF157Q96PX1 679 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms