RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 SIX1Q15475 284 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-201ENST00000314191 DLG2Q15700 870 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 SPDYE1Q8NFV5 336 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-201ENST00000314191 PRKD2Q9BZL6 878 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 ZNF358Q9NW07 568 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 FBXO5Q9UKT4 447 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 GABRQQ9UN88 632 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 RBP1P09455 135 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 IVDP26440 423 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 OR1D2P34982 312 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 KPNA1P52294 538 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-201ENST00000314191 PEBP4Q96S96 227 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 MRPL9Q9BYD2 267 aaKnown RBP6.29□□□□□ -1.4
PRKDC-201ENST00000314191 OLA1Q9NTK5 396 aaKnown RBP6.29□□□□□ -1.4
PRKDC-201ENST00000314191 MYL4P12829 197 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 RAG1P15918 1043 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 SPDYAQ5MJ70 313 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 SCARA3Q6AZY7 606 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 ST13P4Q8IZP2 240 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-201ENST00000314191 TRIM15Q9C019 465 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 SYTL2Q9HCH5 934 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 LGALS13Q9UHV8 139 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 LTBP4Q8N2S1 1624 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 MICAL3Q7RTP6 2002 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 MYH9P35579 1960 aaKnown RBP6.29□□□□□ -1.4
PRKDC-201ENST00000314191 SEC24DO94855 1032 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-201ENST00000314191 RTN3O95197 1032 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-201ENST00000314191 CRTAMO95727 393 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 HIST1H2AGP0C0S8 130 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-201ENST00000314191 ITGB6P18564 788 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 HIST1H2ADP20671 130 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 CDH5P33151 784 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-201ENST00000314191 GABRB2P47870 512 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 CCDC153Q494R4 210 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 ALYREFQ86V81 257 aaKnown RBP6.29□□□□□ -1.4
PRKDC-201ENST00000314191 SNX32Q86XE0 403 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 DEFB107AQ8IZN7 70 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 HIST1H2AHQ96KK5 128 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 HIST1H2AJQ99878 128 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 H2AFJQ9BTM1 129 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 DRC3Q9H069 523 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 POMKQ9H5K3 350 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 GLOD4Q9HC38 313 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 BPIFA1Q9NP55 256 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 TPSB2P20231 275 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 WEE1P30291 646 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 BIRC2Q13490 618 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 ARHGEF7Q14155 803 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 TPSAB1Q15661 275 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 THEMIS2Q5TEJ8 643 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 TTC23LQ6PF05 361 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 C16orf89Q6UX73 402 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 FAXDC2Q96IV6 333 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 TBC1D10AQ9BXI6 508 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 POLR1EQ9GZS1 481 aaKnown RBP6.29□□□□□ -1.4
PRKDC-201ENST00000314191 SLC45A1Q9Y2W3 748 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 ANKRD12Q6UB98 2062 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 CXorf49A8MYA2 514 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-201ENST00000314191 IQCF3P0C7M6 154 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 WNT3AP56704 352 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 PRKAA1Q13131 559 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 MED21Q13503 144 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 GALNT3Q14435 633 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 C6orf10Q5SRN2 563 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 HS6ST3Q8IZP7 471 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 MPP5Q8N3R9 675 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 CCDC126Q96EE4 140 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 ENTPD7Q9NQZ7 604 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 SAR1AQ9NR31 198 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 MIOSQ9NXC5 875 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 GMIPQ9P107 970 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 CA12O43570 354 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 LRIG2O94898 1065 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 TFEBP19484 476 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 NFKBIAP25963 317 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 GRM3Q14832 879 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 MSS51Q4VC12 460 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 RFWD3Q6PCD5 774 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 SLC24A5Q71RS6 500 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 MON1AQ86VX9 555 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 DENND1CQ8IV53 801 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 TSPAN18Q96SJ8 248 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 ACE2Q9BYF1 805 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-201ENST00000314191 IL22Q9GZX6 179 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 DCLRE1BQ9H816 532 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 RGS18Q9NS28 235 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 KCNK4Q9NYG8 393 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 FAM50BQ9Y247 325 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 C2P06681 752 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 BNIP1Q12981 228 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 STX5Q13190 355 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 AGMOQ6ZNB7 445 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 SCUBE1Q8IWY4 988 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 SEMA3CQ99985 751 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 MFHAS1Q9Y4C4 1052 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 LRP5O75197 1615 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 NRP1O14786 923 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 VPS26AO75436 327 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 CCDC166P0CW27 439 aa6.29□□□□□ -1.4
PRKDC-201ENST00000314191 SMAD3P84022 425 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms