RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 ENKURQ8TC29 256 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 VPS35Q96QK1 796 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 YME1L1Q96TA2 773 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 OR2B2Q9GZK3 357 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 KCNK13Q9HB14 408 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.53□□□□□ -0.4
EBF1-201ENST00000313708 CCDC182A6NF36 153 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 TISP43B9A030 160 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 LTKP29376 864 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 SLC7A2P52569 658 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 KCNK10P57789 538 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 SPPL2CQ8IUH8 684 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 FAM162AQ96A26 154 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 CEP170P1Q96L14 293 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 DHX33Q9H6R0 707 aaKnown RBP12.53□□□□□ -0.4
EBF1-201ENST00000313708 C17orf75Q9HAS0 396 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 KCNU1A8MYU2 1149 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 TPPPO94811 219 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 TOMM70O94826 608 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 HSD17B4P51659 736 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 CA9Q16790 459 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 PLEKHM3Q6ZWE6 761 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 LUZP2Q86TE4 346 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 SNX29P2Q8IUI4 249 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 FBXL20Q96IG2 436 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 SP140LQ9H930 580 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 TBC1D22BQ9NU19 505 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.53□□□□□ -0.4
EBF1-201ENST00000313708 TMEM9Q9P0T7 183 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 IFT80Q9P2H3 777 aaPredicted RBP12.53□□□□□ -0.4
EBF1-201ENST00000313708 HESX1Q9UBX0 185 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 ANAPC2Q9UJX6 822 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 SAGE2PA6NJ88 616 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 UNCXA6NJT0 531 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 HDAC3O15379 428 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 HLA-DRAP01903 254 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 AMHP03971 560 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 APOA4P06727 396 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 KBTBD6Q86V97 674 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 FIBCD1Q8N539 461 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 B3GALT6Q96L58 329 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 HGH1Q9BTY7 390 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 ITM2CQ9NQX7 267 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 SNX8Q9Y5X2 465 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 LMTK3Q96Q04 1460 aa12.52□□□□□ -0.4
EBF1-201ENST00000313708 KLF11O14901 512 aa12.52□□□□□ -0.4
EBF1-201ENST00000313708 NBNO60934 754 aa12.52□□□□□ -0.4
EBF1-201ENST00000313708 HPCAL1P37235 193 aa12.52□□□□□ -0.4
EBF1-201ENST00000313708 COLEC12Q5KU26 742 aa12.52□□□□□ -0.4
EBF1-201ENST00000313708 MFSD14BQ5SR56 506 aa12.52□□□□□ -0.4
EBF1-201ENST00000313708 GPAT2Q6NUI2 795 aa12.52□□□□□ -0.4
EBF1-201ENST00000313708 RAB43Q86YS6 212 aa12.52□□□□□ -0.4
EBF1-201ENST00000313708 SVOPQ8N4V2 548 aa12.52□□□□□ -0.4
EBF1-201ENST00000313708 DIABLOQ9NR28 239 aa12.52□□□□□ -0.4
EBF1-201ENST00000313708 ZNF804BA4D1E1 1349 aa12.52□□□□□ -0.4
EBF1-201ENST00000313708 A0A096LPK6 155 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 NRP2O60462 931 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 MPSTP25325 297 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 CAPGP40121 348 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 ABCG1P45844 678 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 EVX2Q03828 476 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 MAMLD1Q13495 774 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 CES3Q6UWW8 571 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 ZBTB33Q86T24 672 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 AMER2Q8N7J2 671 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 ZNF781Q8N8C0 355 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 RNF34Q969K3 372 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 VCPIP1Q96JH7 1222 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 HEXIM2Q96MH2 286 aaKnown RBP12.52□□□□□ -0.41
EBF1-201ENST00000313708 CDK5RAP1Q96SZ6 601 aaKnown RBP12.52□□□□□ -0.41
EBF1-201ENST00000313708 MSTO1Q9BUK6 570 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 SLC25A23Q9BV35 468 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 MIR1-1HGQ9H1L0 117 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 KLHL3Q9UH77 587 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 CPQQ9Y646 472 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 SLC30A1Q9Y6M5 507 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 PIK3C2BO00750 1634 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 SETD1AO15047 1707 aaKnown RBP12.52□□□□□ -0.41
EBF1-201ENST00000313708 RIMBP2O15034 1052 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 UFL1O94874 794 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 MT-ND1P03886 318 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 GPC3P51654 580 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 SLC13A2Q13183 592 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.52□□□□□ -0.41
EBF1-201ENST00000313708 EMC1Q8N766 993 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 OR2T34Q8NGX1 318 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 OR2T3Q8NH03 318 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 SIPA1Q96FS4 1042 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 PTBP2Q9UKA9 531 aaKnown RBP12.52□□□□□ -0.41
EBF1-201ENST00000313708 EML1O00423 815 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 RNASEH2AO75792 299 aaKnown RBP12.52□□□□□ -0.41
EBF1-201ENST00000313708 CCNE2O96020 404 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 GPD2P43304 727 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 RPS9P46781 194 aaKnown RBP12.52□□□□□ -0.41
EBF1-201ENST00000313708 GAD2Q05329 585 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 SLC9B1Q4ZJI4 515 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 PDZD4Q76G19 769 aaPredicted RBP12.52□□□□□ -0.41
EBF1-201ENST00000313708 PID1Q7Z2X4 250 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 PODNQ7Z5L7 613 aa12.52□□□□□ -0.41
EBF1-201ENST00000313708 ZDHHC13Q8IUH4 622 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms