RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 TBC1D3EA0A087X179 549 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 TBC1D3KA0A087X1G2 549 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 TBC1D3FA6NER0 549 aaPredicted RBP8.38□□□□□ -1.07
TPM3-203ENST00000312970 GOLGA8CPA6NN73 597 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 CYSRT1A8MQ03 144 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 TBC1D3LB9A6J9 549 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 M0QYT0 321 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 GRAP2O75791 330 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 DKK1O94907 266 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 TBC1D3HP0C7X1 549 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 CD38P28907 300 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 NOS2P35228 1153 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 PSMD8P48556 350 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 STK19P49842 368 aaPredicted RBP8.38□□□□□ -1.07
TPM3-203ENST00000312970 NME3Q13232 169 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 AUHQ13825 339 aaKnown RBP8.38□□□□□ -1.07
TPM3-203ENST00000312970 KCNJ12Q14500 433 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 ELAVL3Q14576 367 aaKnown RBP8.38□□□□□ -1.07
TPM3-203ENST00000312970 COL28A1Q2UY09 1125 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 INAVAQ3KP66 663 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 ACCSLQ4AC99 568 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 SLC45A4Q5BKX6 768 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 PRAMEF14Q5SWL7 426 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 TBC1D3GQ6DHY5 549 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 TBC1D3CQ6IPX1 549 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 LAYNQ6UX15 382 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.38□□□□□ -1.07
TPM3-203ENST00000312970 TMPRSS7Q7RTY8 843 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 DSG4Q86SJ6 1040 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 ZDHHC17Q8IUH5 632 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 PASD1Q8IV76 773 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 FAM114A1Q8IWE2 563 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 TBC1D3Q8IZP1 549 aaPredicted RBP8.38□□□□□ -1.07
TPM3-203ENST00000312970 GALNT15Q8N3T1 639 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 AADATQ8N5Z0 425 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 ZNF454Q8N9F8 522 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 ALG14Q96F25 216 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 RPRD1AQ96P16 312 aaPredicted RBP8.38□□□□□ -1.07
TPM3-203ENST00000312970 DCBLD2Q96PD2 775 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 SPAG5Q96R06 1193 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 ELF4Q99607 663 aaPredicted RBP8.38□□□□□ -1.07
TPM3-203ENST00000312970 SIK2Q9H0K1 926 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 CCDC86Q9H6F5 360 aaKnown RBP8.38□□□□□ -1.07
TPM3-203ENST00000312970 WDCPQ9H6R7 721 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 SYNCQ9H7C4 482 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 EBF2Q9HAK2 575 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 AASDHPPTQ9NRN7 309 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 TOR4AQ9NXH8 423 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 RRN3Q9NYV6 651 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 SLC25A13Q9UJS0 675 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 TP53BP1Q12888 1972 aaPredicted RBP8.38□□□□□ -1.07
TPM3-203ENST00000312970 CABIN1Q9Y6J0 2220 aa8.38□□□□□ -1.07
TPM3-203ENST00000312970 ZNF462Q96JM2 2506 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 A0A1B0GTQ1 180 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 C10orf142B7Z368 130 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 TLR4O00206 839 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 MCF2LO15068 1137 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 PAGE1O75459 146 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 CLDN11O75508 207 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 F9P00740 461 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 ERBB2P04626 1255 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 WNT1P04628 370 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 VAV1P15498 845 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 ZNF18P17022 549 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 DRD3P35462 400 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 SCNN1AP37088 669 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 NUMBP49757 651 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 ADPRHP54922 357 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 CDH4P55283 916 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 RNASE9P60153 205 aaKnown RBP8.37□□□□□ -1.07
TPM3-203ENST00000312970 DLG2Q15700 870 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 MAN2A1Q16706 1144 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 SWI5Q1ZZU3 235 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 C5orf22Q49AR2 442 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 FAM46CQ5VWP2 391 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 CXorf57Q6NSI4 855 aaKnown RBP8.37□□□□□ -1.07
TPM3-203ENST00000312970 OLFML1Q6UWY5 402 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 FAM183BPQ6ZVS7 135 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 SLC26A9Q7LBE3 791 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 PRPF39Q86UA1 669 aaKnown RBP8.37□□□□□ -1.07
TPM3-203ENST00000312970 SLC47A2Q86VL8 602 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 CIR1Q86X95 450 aaPredicted RBP8.37□□□□□ -1.07
TPM3-203ENST00000312970 ANKMY2Q8IV38 441 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 FAM71AQ8IYT1 594 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 TMEM35BQ8NCS4 154 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 C1orf131Q8NDD1 294 aaKnown RBP8.37□□□□□ -1.07
TPM3-203ENST00000312970 ZNF397Q8NF99 534 aaPredicted RBP8.37□□□□□ -1.07
TPM3-203ENST00000312970 FRS2Q8WU20 508 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 OR8D1Q8WZ84 308 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 SERAC1Q96JX3 654 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 C1orf74Q96LT6 269 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 SLC6A18Q96N87 628 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 PDCL3Q9H2J4 239 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 NDST4Q9H3R1 872 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 SIX2Q9NPC8 291 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 TMEM51Q9NW97 253 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.37□□□□□ -1.07
TPM3-203ENST00000312970 EGFL7Q9UHF1 273 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 VPS28Q9UK41 221 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 VANGL2Q9ULK5 521 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms