RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 GLIPR1L2Q4G1C9 344 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 TMEM240Q5SV17 173 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 HECTD3Q5T447 861 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 RAP1GAP2Q684P5 730 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 NADSYN1Q6IA69 706 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 FBXL22Q6P050 247 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 CYS1Q717R9 158 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 CCNJLQ8IV13 435 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 SRRM1Q8IYB3 904 aaKnown RBP12.14□□□□□ -0.47
TRIM40-205ENST00000307859 TCEAL8Q8IYN2 117 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 GSDMBQ8TAX9 411 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 MZB1Q8WU39 189 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 GBF1Q92538 1859 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 IGSF8Q969P0 613 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 STAMBPL1Q96FJ0 436 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 ZNF512Q96ME7 567 aaPredicted RBP12.14□□□□□ -0.47
TRIM40-205ENST00000307859 ZBP1Q9H171 429 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 CCDC134Q9H6E4 229 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 CASS4Q9NQ75 786 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 PCDHB12Q9Y5F1 795 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 PCDHA11Q9Y5I1 949 aa12.14□□□□□ -0.47
TRIM40-205ENST00000307859 COCHO43405 550 aa12.13□□□□□ -0.47
TRIM40-205ENST00000307859 TLL1O43897 1013 aa12.13□□□□□ -0.47
TRIM40-205ENST00000307859 CNTN5O94779 1100 aa12.13□□□□□ -0.47
TRIM40-205ENST00000307859 HMBSP08397 361 aa12.13□□□□□ -0.47
TRIM40-205ENST00000307859 CTSAP10619 480 aa12.13□□□□□ -0.47
TRIM40-205ENST00000307859 POU3F3P20264 500 aaPredicted RBP12.13□□□□□ -0.47
TRIM40-205ENST00000307859 MSH2P43246 934 aa12.13□□□□□ -0.47
TRIM40-205ENST00000307859 PPP3CCP48454 512 aa12.13□□□□□ -0.47
TRIM40-205ENST00000307859 IFNAR2P48551 515 aa12.13□□□□□ -0.47
TRIM40-205ENST00000307859 PAPOLAP51003 745 aaKnown RBP12.13□□□□□ -0.47
TRIM40-205ENST00000307859 ALFQ53S48 1182 aa12.13□□□□□ -0.47
TRIM40-205ENST00000307859 PRPF39Q86UA1 669 aaKnown RBP12.13□□□□□ -0.47
TRIM40-205ENST00000307859 AUTS2Q8WXX7 1259 aa12.13□□□□□ -0.47
TRIM40-205ENST00000307859 ARNTL2Q8WYA1 636 aa12.13□□□□□ -0.47
TRIM40-205ENST00000307859 CLP1Q92989 425 aaKnown RBP12.13□□□□□ -0.47
TRIM40-205ENST00000307859 PLD4Q96BZ4 506 aa12.13□□□□□ -0.47
TRIM40-205ENST00000307859 ZNF419Q96HQ0 510 aaPredicted RBP12.13□□□□□ -0.47
TRIM40-205ENST00000307859 NAT9Q9BTE0 207 aa12.13□□□□□ -0.47
TRIM40-205ENST00000307859 SLC28A3Q9HAS3 691 aa12.13□□□□□ -0.47
TRIM40-205ENST00000307859 INTS9Q9NV88 658 aaKnown RBP12.13□□□□□ -0.47
TRIM40-205ENST00000307859 TRPM5Q9NZQ8 1165 aa12.13□□□□□ -0.47
TRIM40-205ENST00000307859 INSL5Q9Y5Q6 135 aa12.13□□□□□ -0.47
TRIM40-205ENST00000307859 MAD1L1Q9Y6D9 718 aa12.13□□□□□ -0.47
TRIM40-205ENST00000307859 ANKRD36A6QL64 1941 aa12.13□□□□□ -0.47
TRIM40-205ENST00000307859 MYO9BQ13459 2157 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 DOCK6Q96HP0 2047 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 ERICH4A6NGS2 130 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 FAM159BA6NKW6 160 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 GRXCR1A8MXD5 290 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 PRRG1O14668 218 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 TEX28O15482 410 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 PRPF4O43172 522 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRIM40-205ENST00000307859 PSMD3O43242 534 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 FGF18O76093 207 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 ALDH1A2O94788 518 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 PEX11BO96011 259 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 OAS1P00973 400 aaKnown RBP12.12□□□□□ -0.47
TRIM40-205ENST00000307859 FGBP02675 491 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 PGAM1P18669 254 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 KRT15P19012 456 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 TACR2P21452 398 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 MGAT1P26572 445 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 MAPKAPK2P49137 400 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 SLC18A1P54219 525 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 TWF1Q12792 350 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 PLD1Q13393 1074 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 SPARCL1Q14515 664 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 PRPSAP1Q14558 356 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 ANO4Q32M45 955 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 PSRC1Q6PGN9 363 aaPredicted RBP12.12□□□□□ -0.47
TRIM40-205ENST00000307859 TFAP2DQ7Z6R9 452 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 CHSY1Q86X52 802 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 FIBCD1Q8N539 461 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 BCAS4Q8TDM0 211 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 AZIN2Q96A70 460 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 PPP1R2P1Q96PQ5 205 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 FCRL5Q96RD9 977 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 TRABDQ9H4I3 376 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 RETREG1Q9H6L5 497 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 LRRC40Q9H9A6 602 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 GLOD4Q9HC38 313 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 SSU72Q9NP77 194 aaKnown RBP12.12□□□□□ -0.47
TRIM40-205ENST00000307859 MOCS1Q9NZB8 636 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 IPO11Q9UI26 975 aaKnown RBP12.12□□□□□ -0.47
TRIM40-205ENST00000307859 ZNF180Q9UJW8 692 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 SSX2IPQ9Y2D8 614 aa12.12□□□□□ -0.47
TRIM40-205ENST00000307859 GMNCA6NCL1 334 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 FAM86C2PA6NEL3 165 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 ZBBXA8MT70 800 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 ACSL4O60488 711 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 PIAS1O75925 651 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 ELF1P32519 619 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 SEC24CP53992 1094 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 EPHB3P54753 998 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 SESN2P58004 480 aaPredicted RBP12.11□□□□□ -0.47
TRIM40-205ENST00000307859 NHLH1Q02575 133 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 PPARDQ03181 441 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 MPP2Q14168 576 aa12.11□□□□□ -0.47
TRIM40-205ENST00000307859 ZSCAN26Q16670 478 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms