RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 RBM15Q96T37 977 aaKnown RBP eCLIP13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 IL12RB2Q99665 862 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 MED4Q9NPJ6 270 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 EIF2B3Q9NR50 452 aaKnown RBP13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 SMPD4Q9NXE4 827 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 OGFRQ9NZT2 677 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 TCRBV7S3A2A0A539 114 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 RASA4BC9J798 803 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 RIPK2O43353 540 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 RASA4O43374 803 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 TMEM63AO94886 807 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 PRAMEF12O95522 483 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 TTC4O95801 387 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 MAGEA4P43358 317 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 PAPOLAP51003 745 aaKnown RBP13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 IRAK1P51617 712 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 HIF1AQ16665 826 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 PID1Q7Z2X4 250 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 NETO2Q8NC67 525 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 SMRP1Q8NCR6 262 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 RIN3Q8TB24 985 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 UBLCP1Q8WVY7 318 aaPredicted RBP13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 MYEOVQ96EZ4 313 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ZIM3Q96PE6 472 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 SH3GL2Q99962 352 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 TMEM109Q9BVC6 243 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 MAGEH1Q9H213 219 aa13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 IPO11Q9UI26 975 aaKnown RBP13.12□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 HELZP42694 1942 aaKnown RBP13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ERI2A8K979 691 aaKnown RBP13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 KCNK1O00180 336 aa13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 DFFAO00273 331 aa13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 OPA1O60313 960 aa13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 RAMP2O60895 175 aa13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CCNB1P14635 433 aa13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 TCF3P15923 654 aa13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 TSHRP16473 764 aa13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 IFNAR2P48551 515 aa13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 HNRNPDQ14103 355 aaKnown RBP13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CBX2Q14781 532 aaPredicted RBP13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ANO4Q32M45 955 aa13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ATAT1Q5SQI0 421 aa13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ITPRIPL1Q6GPH6 555 aa13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 SETD3Q86TU7 594 aaPredicted RBP13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CCDC25Q86WR0 208 aa13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 PDIK1LQ8N165 341 aa13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 MICALL1Q8N3F8 863 aa13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CPXM2Q8N436 756 aa13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 FGF13Q92913 245 aa13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 USP13Q92995 863 aaPredicted RBP13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 TTC25Q96NG3 672 aa13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 SMG9Q9H0W8 520 aaKnown RBP13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CDC42EP4Q9H3Q1 356 aaKnown RBP13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 LSM7Q9UK45 103 aaKnown RBP13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CCL26Q9Y258 94 aa13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 PLAAQ9Y263 795 aa13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 TBC1D30Q9Y2I9 924 aa13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 DENND4AQ7Z401 1863 aa13.11□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 BRWD1Q9NSI6 2320 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 A0A1B0GVM2 712 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ILVBLA1L0T0 632 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 TCAF2A6NFQ2 919 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 JCHAINP01591 159 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ABHD2P08910 425 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 MLNP12872 115 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 OR1E1P30953 314 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 SARNPP82979 210 aaKnown RBP13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 SERINC3Q13530 473 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 POLD3Q15054 466 aaPredicted RBP13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CES5AQ6NT32 575 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 RFWD3Q6PCD5 774 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ZNF783Q6ZMS7 281 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 TFAP2DQ7Z6R9 452 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 TEX26Q8N6G2 289 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 KIAA1958Q8N8K9 716 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 SUSD6Q92537 303 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 LRRC39Q96DD0 335 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 PWWP2AQ96N64 755 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 PPP1R2P1Q96PQ5 205 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 GBA3Q9H227 469 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 XAB2Q9HCS7 855 aaKnown RBP13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 TDP1Q9NUW8 608 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 SEPT10Q9P0V9 454 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 KLHL8Q9P2G9 620 aaPredicted RBP13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ZFP37Q9Y6Q3 630 aaPredicted RBP13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 UNC80Q8N2C7 3258 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CHD5Q8TDI0 1954 aa13.1□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 E2F8A0AVK6 867 aa13.09□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 LEFTY2O00292 366 aa13.09□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ZBTB24O43167 697 aaPredicted RBP13.09□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 PSMD3O43242 534 aa13.09□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 SYF2O95926 243 aaKnown RBP13.09□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 PEX11BO96011 259 aa13.09□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 APRTP07741 180 aa13.09□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 IRF1P10914 325 aa13.09□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CD68P34810 354 aaPredicted RBP13.09□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 AVPR1AP37288 418 aa13.09□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 MTHFRP42898 656 aa13.09□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 MAGEA3P43357 314 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms