RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 SLC25A14O95258 325 aaPredicted RBP10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 PGAM1P18669 254 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 CNTFP26441 200 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 TRPC1P48995 793 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 MAMLD1Q13495 774 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 E2F4Q16254 413 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 LRIG3Q6UXM1 1119 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 NLRP14Q86W24 1093 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 USP6NLQ92738 828 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 SEMA3CQ99985 751 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 ZNF214Q9UL59 606 aaPredicted RBP10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 ANKDD1BA6NHY2 528 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 SLC10A3P09131 477 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 ARL2P36404 184 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 MGAT5Q09328 741 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 MMRN1Q13201 1228 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 FLOT2Q14254 428 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 MFSD7Q6UXD7 560 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 SPATA21Q7Z572 469 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 STX19Q8N4C7 294 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 SHDQ96IW2 340 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 PCDH9Q9HC56 1237 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 WARS2Q9UGM6 360 aaKnown RBP10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 TMEM120BA0PK00 339 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 SLC2A4P14672 509 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 GOT1P17174 413 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 CYP3A5P20815 502 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 RBL1P28749 1068 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 CRY1Q16526 586 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 CYP2A13Q16696 494 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 USP7Q93009 1102 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 VAT1Q99536 393 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 TXNRD2Q9NNW7 524 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 SLC27A6Q9Y2P4 619 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 DAB1O75553 588 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 ATP6AP1LQ52LC2 224 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 TMEM63BQ5T3F8 832 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 CAPN6Q9Y6Q1 641 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 KLHL2O95198 593 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 MATKP42679 507 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 NR6A1Q15406 480 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 CDKAL1Q5VV42 579 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 CRTC3Q6UUV7 619 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 NRSN1Q8IZ57 195 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 FBXO39Q8N4B4 442 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 DIS3LQ8TF46 1054 aaKnown RBP10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 SNX27Q96L92 541 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 STARD13Q9Y3M8 1113 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 RAD54BQ9Y620 910 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 SLC38A8A6NNN8 435 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 FTH1P02794 183 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 CFIP05156 583 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 DGKAP23743 735 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 GDI1P31150 447 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 PGM1P36871 562 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 ERFP50548 548 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 LYPLAL1Q5VWZ2 237 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 DNAJC19Q96DA6 116 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 FCRL2Q96LA5 508 aaPredicted RBP10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 DACH2Q96NX9 599 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 SNRNP25Q9BV90 132 aaKnown RBP10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 CACNA1SQ13698 1873 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 B4GALT4O60513 344 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 PFKMP08237 780 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 PYGMP11217 842 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 KELP23276 732 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 BLVRAP53004 296 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 GPSM1Q86YR5 675 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 SIX5Q8N196 739 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 HDDC3Q8N4P3 179 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 CMTM5Q96DZ9 223 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 BTN2A3PQ96KV6 586 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 MFSD14AQ96MC6 490 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 ARMC7Q9H6L4 198 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 MRGBPQ9NV56 204 aa10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 SAE1Q9UBE0 346 aaPredicted RBP10.87□□□□□ -0.67
SYNPO2-201ENST00000307142 ISM1B1AKI9 464 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 STBD1O95210 358 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 ATP4AP20648 1035 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 DGKEP52429 567 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 ARHGAP1Q07960 439 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 PDPK2PQ6A1A2 396 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 PHYKPLQ8IUZ5 450 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 CEP70Q8NHQ1 597 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 BSNDQ8WZ55 320 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 HERVK_113Q902F9 699 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 FAM126AQ9BYI3 521 aaPredicted RBP10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 BTAF1O14981 1849 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 NRP1O14786 923 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 SERPINI2O75830 405 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 ABRQ12979 859 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 PSTKQ8IV42 348 aaKnown RBP10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 ICA1LQ8NDH6 482 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 PPP1R10Q96QC0 940 aaKnown RBP10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 PCDHA3Q9Y5H8 950 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 ANXA5P08758 320 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 SLC35G4P0C7Q5 338 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms