RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 E2F6O75461 281 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 RNASEH2AO75792 299 aaKnown RBP13.26□□□□□ -0.29
TRIM35-201ENST00000305364 LRPAP1P30533 357 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 PLK1P53350 603 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 DGKZQ13574 1117 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 FAM83EQ2M2I3 478 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 NANOGNBQ7Z5D8 188 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 SNX31Q8N9S9 440 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 TRPC4APQ8TEL6 797 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 C12orf43Q96C57 262 aaKnown RBP13.26□□□□□ -0.29
TRIM35-201ENST00000305364 FBXL8Q96CD0 374 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 C2orf40Q9H1Z8 148 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 LHX5Q9H2C1 402 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 ARMC7Q9H6L4 198 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 ATAD3AQ9NVI7 634 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 BARX2Q9UMQ3 279 aaPredicted RBP13.26□□□□□ -0.29
TRIM35-201ENST00000305364 WDR37Q9Y2I8 494 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 ITGB4P16144 1822 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 NR5A2O00482 541 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 TPSB2P20231 275 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 CHRNA5P30532 468 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 BNIP3Q12983 259 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 CEACAM7Q14002 265 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 TRIM25Q14258 630 aaKnown RBP13.26□□□□□ -0.29
TRIM35-201ENST00000305364 TPSAB1Q15661 275 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 SPANXN3Q5MJ09 141 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 EPGNQ6UW88 154 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 KIAA2013Q8IYS2 634 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 LPAR1Q92633 364 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 VPS39Q96JC1 886 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 ZNF277Q9NRM2 450 aaPredicted RBP13.26□□□□□ -0.29
TRIM35-201ENST00000305364 INPP4BO15327 924 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 FAM189A1O60320 539 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 HNRNPLP14866 589 aaKnown RBP eCLIP13.25□□□□□ -0.29
TRIM35-201ENST00000305364 CA9Q16790 459 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 MGAT5BQ3V5L5 792 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 DCAF6Q58WW2 860 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 ZNF618Q5T7W0 954 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 CBR4Q8N4T8 237 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 MAGEE2Q8TD90 523 aaPredicted RBP13.25□□□□□ -0.29
TRIM35-201ENST00000305364 KCTD4Q8WVF5 259 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 SPAG4Q9NPE6 437 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 EGFL7Q9UHF1 273 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 COL22A1Q8NFW1 1626 aaPredicted RBP13.25□□□□□ -0.29
TRIM35-201ENST00000305364 KPNA4O00629 521 aaPredicted RBP13.25□□□□□ -0.29
TRIM35-201ENST00000305364 PAPSS1O43252 624 aaPredicted RBP13.25□□□□□ -0.29
TRIM35-201ENST00000305364 TTKP33981 857 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 FUT11Q495W5 492 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 LDLRAP1Q5SW96 308 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 LIPMQ5VYY2 423 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 RNF111Q6ZNA4 994 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 KIF12Q96FN5 646 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 PEBP4Q96S96 227 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 TCF12Q99081 682 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 ZNF510Q9Y2H8 683 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 ATP6AP2A0A1C7CYW4 349 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 ATP6AP2O75787 350 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 UGT1A6P19224 532 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 UGT1A1P22309 533 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 UGT1A4P22310 534 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 UGT1A3P35503 534 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 UGT1A5P35504 534 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 NR2C2P49116 596 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 SLC7A2P52569 658 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 MS4A2Q01362 244 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 ITKQ08881 620 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 NAB1Q13506 487 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 B3GNT9Q6UX72 402 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 ZPBP2Q6X784 338 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 CCDC80Q76M96 950 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 TAS1R3Q7RTX0 852 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 VSIG10LQ86VR7 867 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 OFCC1Q8IZS5 231 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 TERB1Q8NA31 727 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 DQX1Q8TE96 717 aaKnown RBP13.25□□□□□ -0.29
TRIM35-201ENST00000305364 PHF21BQ96EK2 531 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 SEPHS2Q99611 448 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 FAIMQ9NVQ4 179 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 MYO18AQ92614 2054 aaKnown RBP13.25□□□□□ -0.29
TRIM35-201ENST00000305364 MYH9P35579 1960 aaKnown RBP13.25□□□□□ -0.29
TRIM35-201ENST00000305364 PAPPAQ13219 1627 aa13.25□□□□□ -0.29
TRIM35-201ENST00000305364 A0A1W2PPW3 197 aa13.24□□□□□ -0.29
TRIM35-201ENST00000305364 M0R3G1 203 aa13.24□□□□□ -0.29
TRIM35-201ENST00000305364 SUPT7LO94864 414 aa13.24□□□□□ -0.29
TRIM35-201ENST00000305364 PTPN1P18031 435 aaKnown RBP13.24□□□□□ -0.29
TRIM35-201ENST00000305364 IRF9Q00978 393 aa13.24□□□□□ -0.29
TRIM35-201ENST00000305364 CAPSQ13938 189 aa13.24□□□□□ -0.29
TRIM35-201ENST00000305364 PLCL1Q15111 1095 aa13.24□□□□□ -0.29
TRIM35-201ENST00000305364 UGP2Q16851 508 aa13.24□□□□□ -0.29
TRIM35-201ENST00000305364 HSF5Q4G112 596 aaPredicted RBP13.24□□□□□ -0.29
TRIM35-201ENST00000305364 PDCD4Q53EL6 469 aaKnown RBP13.24□□□□□ -0.29
TRIM35-201ENST00000305364 FSTL4Q6MZW2 842 aa13.24□□□□□ -0.29
TRIM35-201ENST00000305364 OGFOD2Q6N063 350 aa13.24□□□□□ -0.29
TRIM35-201ENST00000305364 MPZL3Q6UWV2 235 aa13.24□□□□□ -0.29
TRIM35-201ENST00000305364 C12orf29Q8N999 325 aa13.24□□□□□ -0.29
TRIM35-201ENST00000305364 PIF1Q9H611 641 aa13.24□□□□□ -0.29
TRIM35-201ENST00000305364 TBCCD1Q9NVR7 557 aa13.24□□□□□ -0.29
TRIM35-201ENST00000305364 CEPT1Q9Y6K0 416 aa13.24□□□□□ -0.29
TRIM35-201ENST00000305364 DDX60LQ5H9U9 1706 aaKnown RBP13.24□□□□□ -0.29
TRIM35-201ENST00000305364 ALOX15P16050 662 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms