RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 SERGEFQ9UGK8 458 aa27.1■■□□□ 1.93
CDKN2A-201ENST00000304494 PCDH15Q96QU1 1955 aa27.09■■□□□ 1.93
CDKN2A-201ENST00000304494 A0A0D9SEW6 157 aa27.09■■□□□ 1.93
CDKN2A-201ENST00000304494 LRRC72A6NJI9 287 aa27.09■■□□□ 1.93
CDKN2A-201ENST00000304494 ALOX15BO15296 676 aa27.09■■□□□ 1.93
CDKN2A-201ENST00000304494 FSBPO95073 299 aa27.09■■□□□ 1.93
CDKN2A-201ENST00000304494 GOT1P17174 413 aa27.09■■□□□ 1.93
CDKN2A-201ENST00000304494 CSRP1P21291 193 aaKnown RBP27.09■■□□□ 1.93
CDKN2A-201ENST00000304494 CLCN6P51797 869 aa27.09■■□□□ 1.93
CDKN2A-201ENST00000304494 SKOR2Q2VWA4 1001 aaPredicted RBP27.09■■□□□ 1.93
CDKN2A-201ENST00000304494 FIGNQ5HY92 759 aa27.09■■□□□ 1.93
CDKN2A-201ENST00000304494 FAM46CQ5VWP2 391 aa27.09■■□□□ 1.93
CDKN2A-201ENST00000304494 PSAPL1Q6NUJ1 521 aa27.09■■□□□ 1.93
CDKN2A-201ENST00000304494 DCUN1D2Q6PH85 259 aa27.09■■□□□ 1.93
CDKN2A-201ENST00000304494 BIRC7Q96CA5 298 aa27.09■■□□□ 1.93
CDKN2A-201ENST00000304494 CCDC114Q96M63 670 aa27.09■■□□□ 1.93
CDKN2A-201ENST00000304494 TTYH3Q9C0H2 523 aa27.09■■□□□ 1.93
CDKN2A-201ENST00000304494 HAUS4Q9H6D7 363 aa27.09■■□□□ 1.93
CDKN2A-201ENST00000304494 ZNF212Q9UDV6 495 aa27.09■■□□□ 1.93
CDKN2A-201ENST00000304494 FARP1Q9Y4F1 1045 aaPredicted RBP27.09■■□□□ 1.93
CDKN2A-201ENST00000304494 SNAP91O60641 907 aa27.08■■□□□ 1.93
CDKN2A-201ENST00000304494 SRCP12931 536 aa27.08■■□□□ 1.93
CDKN2A-201ENST00000304494 RRM1P23921 792 aa27.08■■□□□ 1.93
CDKN2A-201ENST00000304494 PRKCIP41743 596 aa27.08■■□□□ 1.93
CDKN2A-201ENST00000304494 NOVA1P51513 510 aaKnown RBP27.08■■□□□ 1.93
CDKN2A-201ENST00000304494 AFF3P51826 1226 aaKnown RBP27.08■■□□□ 1.93
CDKN2A-201ENST00000304494 GALCP54803 685 aa27.08■■□□□ 1.93
CDKN2A-201ENST00000304494 FANCCQ00597 558 aa27.08■■□□□ 1.93
CDKN2A-201ENST00000304494 GRIK2Q13002 908 aa27.08■■□□□ 1.93
CDKN2A-201ENST00000304494 PPP1R15BQ5SWA1 713 aa27.08■■□□□ 1.93
CDKN2A-201ENST00000304494 MANEALQ5VSG8 457 aa27.08■■□□□ 1.93
CDKN2A-201ENST00000304494 KIAA0895LQ68EN5 471 aa27.08■■□□□ 1.93
CDKN2A-201ENST00000304494 RWDD4Q6NW29 188 aaKnown RBP27.08■■□□□ 1.93
CDKN2A-201ENST00000304494 Q6ZVU0 165 aa27.08■■□□□ 1.93
CDKN2A-201ENST00000304494 AADATQ8N5Z0 425 aa27.08■■□□□ 1.93
CDKN2A-201ENST00000304494 CCDC185Q8N715 623 aa27.08■■□□□ 1.93
CDKN2A-201ENST00000304494 OR2T34Q8NGX1 318 aa27.08■■□□□ 1.93
CDKN2A-201ENST00000304494 C1orf216Q8TAB5 229 aa27.08■■□□□ 1.93
CDKN2A-201ENST00000304494 CNPY3Q9BT09 278 aa27.08■■□□□ 1.93
CDKN2A-201ENST00000304494 OSGEPQ9NPF4 335 aa27.08■■□□□ 1.93
CDKN2A-201ENST00000304494 DNAAF2Q9NVR5 837 aaKnown RBP27.08■■□□□ 1.93
CDKN2A-201ENST00000304494 NYNRINQ9P2P1 1898 aaKnown RBP27.08■■□□□ 1.93
CDKN2A-201ENST00000304494 GON4LQ3T8J9 2241 aa27.08■■□□□ 1.92
CDKN2A-201ENST00000304494 PI4KAP42356 2102 aa27.07■■□□□ 1.92
CDKN2A-201ENST00000304494 FAM47DPA6NHR8 397 aa27.07■■□□□ 1.92
CDKN2A-201ENST00000304494 UPK3BL1B0FP48 263 aa27.07■■□□□ 1.92
CDKN2A-201ENST00000304494 UPK3BL2E5RIL1 263 aa27.07■■□□□ 1.92
CDKN2A-201ENST00000304494 C1QTNF3-AMACRE9PGA6 284 aa27.07■■□□□ 1.92
CDKN2A-201ENST00000304494 MCF2LO15068 1137 aa27.07■■□□□ 1.92
CDKN2A-201ENST00000304494 CCP110O43303 1012 aa27.07■■□□□ 1.92
CDKN2A-201ENST00000304494 PLEKP08567 350 aaPredicted RBP27.07■■□□□ 1.92
CDKN2A-201ENST00000304494 CEACAM1P13688 526 aa27.07■■□□□ 1.92
CDKN2A-201ENST00000304494 CD27P26842 260 aa27.07■■□□□ 1.92
CDKN2A-201ENST00000304494 ETFBP38117 255 aa27.07■■□□□ 1.92
CDKN2A-201ENST00000304494 GNA12Q03113 381 aa27.07■■□□□ 1.92
CDKN2A-201ENST00000304494 KLHL30Q0D2K2 578 aa27.07■■□□□ 1.92
CDKN2A-201ENST00000304494 SCAPQ12770 1279 aa27.07■■□□□ 1.92
CDKN2A-201ENST00000304494 ZSCAN23Q3MJ62 389 aa27.07■■□□□ 1.92
CDKN2A-201ENST00000304494 RETSATQ6NUM9 610 aa27.07■■□□□ 1.92
CDKN2A-201ENST00000304494 SLFN11Q7Z7L1 901 aa27.07■■□□□ 1.92
CDKN2A-201ENST00000304494 DRC7Q8IY82 874 aa27.07■■□□□ 1.92
CDKN2A-201ENST00000304494 SPON2Q9BUD6 331 aa27.07■■□□□ 1.92
CDKN2A-201ENST00000304494 SLC32A1Q9H598 525 aa27.07■■□□□ 1.92
CDKN2A-201ENST00000304494 ATP13A1Q9HD20 1204 aa27.07■■□□□ 1.92
CDKN2A-201ENST00000304494 PARVAQ9NVD7 372 aa27.07■■□□□ 1.92
CDKN2A-201ENST00000304494 TAS2R14Q9NYV8 317 aa27.07■■□□□ 1.92
CDKN2A-201ENST00000304494 TMCO5BA8MYB1 307 aa27.06■■□□□ 1.92
CDKN2A-201ENST00000304494 MT-CO1P00395 513 aa27.06■■□□□ 1.92
CDKN2A-201ENST00000304494 RHOQP17081 205 aa27.06■■□□□ 1.92
CDKN2A-201ENST00000304494 MAPKAPK2P49137 400 aa27.06■■□□□ 1.92
CDKN2A-201ENST00000304494 AIF1P55008 147 aa27.06■■□□□ 1.92
CDKN2A-201ENST00000304494 UBASH3AP57075 661 aa27.06■■□□□ 1.92
CDKN2A-201ENST00000304494 RPL7AP62424 266 aaKnown RBP27.06■■□□□ 1.92
CDKN2A-201ENST00000304494 SEMA3BQ13214 749 aa27.06■■□□□ 1.92
CDKN2A-201ENST00000304494 SLC14A1Q13336 389 aa27.06■■□□□ 1.92
CDKN2A-201ENST00000304494 TEAD4Q15561 434 aa27.06■■□□□ 1.92
CDKN2A-201ENST00000304494 EFHC2Q5JST6 749 aa27.06■■□□□ 1.92
CDKN2A-201ENST00000304494 NCEH1Q6PIU2 408 aa27.06■■□□□ 1.92
CDKN2A-201ENST00000304494 IL27RAQ6UWB1 636 aa27.06■■□□□ 1.92
CDKN2A-201ENST00000304494 ZNF571Q7Z3V5 609 aaPredicted RBP27.06■■□□□ 1.92
CDKN2A-201ENST00000304494 OR7D4Q8NG98 312 aa27.06■■□□□ 1.92
CDKN2A-201ENST00000304494 TBC1D31Q96DN5 1066 aa27.06■■□□□ 1.92
CDKN2A-201ENST00000304494 PPM1HQ9ULR3 514 aa27.06■■□□□ 1.92
CDKN2A-201ENST00000304494 TPX2Q9ULW0 747 aaKnown RBP27.06■■□□□ 1.92
CDKN2A-201ENST00000304494 CBX4O00257 560 aa27.05■■□□□ 1.92
CDKN2A-201ENST00000304494 SLC7A4O43246 635 aa27.05■■□□□ 1.92
CDKN2A-201ENST00000304494 BNIP3LO60238 219 aa27.05■■□□□ 1.92
CDKN2A-201ENST00000304494 LRIG2O94898 1065 aa27.05■■□□□ 1.92
CDKN2A-201ENST00000304494 IGHV4-34P06331 123 aa27.05■■□□□ 1.92
CDKN2A-201ENST00000304494 GZMAP12544 262 aa27.05■■□□□ 1.92
CDKN2A-201ENST00000304494 ADPRHP54922 357 aa27.05■■□□□ 1.92
CDKN2A-201ENST00000304494 SLC20A2Q08357 652 aa27.05■■□□□ 1.92
CDKN2A-201ENST00000304494 N4BP2L1Q5TBK1 243 aaPredicted RBP27.05■■□□□ 1.92
CDKN2A-201ENST00000304494 SCYL2Q6P3W7 929 aa27.05■■□□□ 1.92
CDKN2A-201ENST00000304494 TMEM248Q9NWD8 314 aa27.05■■□□□ 1.92
CDKN2A-201ENST00000304494 CXorf51AA0A1B0GTR3 108 aa27.04■■□□□ 1.92
CDKN2A-201ENST00000304494 A0A1W2PQJ5 194 aa27.04■■□□□ 1.92
CDKN2A-201ENST00000304494 FAM72CH0Y354 149 aa27.04■■□□□ 1.92
CDKN2A-201ENST00000304494 DRD3P35462 400 aa27.04■■□□□ 1.92
CDKN2A-201ENST00000304494 MAMLD1Q13495 774 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms