RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 GANQ9H2C0 597 aa17.1■□□□□ 0.33
TRAPPC1-201ENST00000303731 RETREG1Q9H6L5 497 aa17.1■□□□□ 0.33
TRAPPC1-201ENST00000303731 AASDHPPTQ9NRN7 309 aa17.1■□□□□ 0.33
TRAPPC1-201ENST00000303731 TMEM59LQ9UK28 342 aa17.1■□□□□ 0.33
TRAPPC1-201ENST00000303731 PPM1HQ9ULR3 514 aa17.1■□□□□ 0.33
TRAPPC1-201ENST00000303731 WDFY3Q8IZQ1 3526 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 TBC1D3DA0A087WVF3 549 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 TBC1D3IA0A087WXS9 549 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 TBC1D3EA0A087X179 549 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 TBC1D3KA0A087X1G2 549 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 TBC1D3FA6NER0 549 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 TBC1D3LB9A6J9 549 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 PLRG1O43660 514 aaKnown RBP17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 MAGEC1O60732 1142 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 MMEP08473 750 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 TBC1D3HP0C7X1 549 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 VAV1P15498 845 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 SOX5P35711 763 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 FLT3P36888 993 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 GGCXP38435 758 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 IRAK1P51617 712 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 POLR2FP61218 127 aaKnown RBP17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 NAA35Q5VZE5 725 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 TBC1D3GQ6DHY5 549 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 TBC1D3CQ6IPX1 549 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 SASS6Q6UVJ0 657 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 PRPF39Q86UA1 669 aaKnown RBP17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 ZNF683Q8IZ20 524 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 TBC1D3Q8IZP1 549 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 OXR1Q8N573 874 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 ATP11CQ8NB49 1132 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 OR52K2Q8NGK3 314 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 CPA5Q8WXQ8 436 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 SLC6A18Q96N87 628 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 VPS16Q9H269 839 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 ANO10Q9NW15 660 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 NOCTQ9UK39 431 aaKnown RBP17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 ZMIZ1Q9ULJ6 1067 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 DMTF1Q9Y222 760 aa17.09■□□□□ 0.33
TRAPPC1-201ENST00000303731 A0A1B0GTQ1 180 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 CXorf51AA0A1B0GTR3 108 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 ILVBLA1L0T0 632 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 E9PAM4 449 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 H0Y8X5 98 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 GOLGA8SH3BPF8 625 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 TNFSF14O43557 240 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 CNTN5O94779 1100 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 ENDOD1O94919 500 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 CYP1A1P04798 512 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 SRCP12931 536 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 TFE3P19532 575 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 MMP8P22894 467 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 OR1E1P30953 314 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 STAT1P42224 750 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 JAM2P57087 298 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 OVGP1Q12889 678 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 ARL13BQ3SXY8 428 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 ALFQ53S48 1182 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 NAPEPLDQ6IQ20 393 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 RETSATQ6NUM9 610 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 Q6ZVU0 165 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 IQCHQ86VS3 1027 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 TRIM69Q86WT6 500 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 PIP4K2CQ8TBX8 421 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 ZCCHC14Q8WYQ9 949 aaKnown RBP17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 SERAC1Q96JX3 654 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 CFAP57Q96MR6 1250 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 ELF4Q99607 663 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 ZYG11BQ9C0D3 744 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 PREBQ9HCU5 417 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 ANLNQ9NQW6 1124 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 GDF3Q9NR23 364 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 FAM207AQ9NSI2 230 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 PPARGC1AQ9UBK2 798 aaKnown RBP17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 VPS51Q9UID3 782 aa17.08■□□□□ 0.32
TRAPPC1-201ENST00000303731 COL5A1P20908 1838 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC1-201ENST00000303731 FAM208BQ5VWN6 2430 aa17.07■□□□□ 0.32
TRAPPC1-201ENST00000303731 SPEGQ15772 3267 aa17.07■□□□□ 0.32
TRAPPC1-201ENST00000303731 CFAP47Q6ZTR5 3102 aa17.07■□□□□ 0.32
TRAPPC1-201ENST00000303731 I6L893 689 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC1-201ENST00000303731 GFPT2O94808 682 aa17.07■□□□□ 0.32
TRAPPC1-201ENST00000303731 DKK1O94907 266 aa17.07■□□□□ 0.32
TRAPPC1-201ENST00000303731 PRNPP04156 253 aa17.07■□□□□ 0.32
TRAPPC1-201ENST00000303731 SDC4P31431 198 aa17.07■□□□□ 0.32
TRAPPC1-201ENST00000303731 ETFBP38117 255 aa17.07■□□□□ 0.32
TRAPPC1-201ENST00000303731 ARRB1P49407 418 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC1-201ENST00000303731 MYL5Q02045 173 aa17.07■□□□□ 0.32
TRAPPC1-201ENST00000303731 SLC20A2Q08357 652 aa17.07■□□□□ 0.32
TRAPPC1-201ENST00000303731 STX1AQ16623 288 aa17.07■□□□□ 0.32
TRAPPC1-201ENST00000303731 SETMARQ53H47 684 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC1-201ENST00000303731 AGBL4Q5VU57 503 aa17.07■□□□□ 0.32
TRAPPC1-201ENST00000303731 NEK5Q6P3R8 708 aa17.07■□□□□ 0.32
TRAPPC1-201ENST00000303731 LAYNQ6UX15 382 aa17.07■□□□□ 0.32
TRAPPC1-201ENST00000303731 MFSD2AQ8NA29 543 aa17.07■□□□□ 0.32
TRAPPC1-201ENST00000303731 TMIEQ8NEW7 156 aa17.07■□□□□ 0.32
TRAPPC1-201ENST00000303731 PSMB7Q99436 277 aa17.07■□□□□ 0.32
TRAPPC1-201ENST00000303731 ERVMER34-1Q9H9K5 563 aa17.07■□□□□ 0.32
TRAPPC1-201ENST00000303731 EBF2Q9HAK2 575 aa17.07■□□□□ 0.32
TRAPPC1-201ENST00000303731 DYRK4Q9NR20 520 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms