RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 CALR3Q96L12 384 aaKnown RBP7.92□□□□□ -1.14
SCN9A-201ENST00000303354 KLHL25Q9H0H3 589 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 SEMA6AQ9H2E6 1030 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 BTBD7Q9P203 1132 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 GLRA3O75311 464 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 GOT1P17174 413 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 GATMP50440 423 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 FAM171BQ6P995 826 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 IRS2Q9Y4H2 1338 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 CES2O00748 559 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 COX7A2P14406 83 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 CPA3P15088 417 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 HSD17B3P37058 310 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 ERVK-21P61565 698 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 IL5RAQ01344 420 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 AKIRIN2Q53H80 203 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 ATAD3BQ5T9A4 648 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 ZNF410Q86VK4 478 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 ABRAQ8N0Z2 381 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 ZCCHC10Q8TBK6 192 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 C1QTNF7Q9BXJ2 289 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 NRDE2Q9H7Z3 1164 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 SLC12A4Q9UP95 1085 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 CHKBQ9Y259 395 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 FCF1Q9Y324 198 aaKnown RBP7.92□□□□□ -1.14
SCN9A-201ENST00000303354 PEX11AO75192 247 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 CCNA2P20248 432 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 RBBP4Q09028 425 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 CCNI2Q6ZMN8 369 aaPredicted RBP7.92□□□□□ -1.14
SCN9A-201ENST00000303354 NYAP1Q6ZVC0 841 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 CDT1Q9H211 546 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 SYBUQ9NX95 663 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 DCDC2Q9UHG0 476 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 ZFP37Q9Y6Q3 630 aaPredicted RBP7.92□□□□□ -1.14
SCN9A-201ENST00000303354 PXDNQ92626 1479 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 CNPP09543 421 aaKnown RBP7.92□□□□□ -1.14
SCN9A-201ENST00000303354 IRX1P78414 480 aaPredicted RBP7.92□□□□□ -1.14
SCN9A-201ENST00000303354 PFKFB4Q16877 469 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 N4BP2L1Q5TBK1 243 aaPredicted RBP7.92□□□□□ -1.14
SCN9A-201ENST00000303354 CHST15Q7LFX5 561 aaPredicted RBP7.92□□□□□ -1.14
SCN9A-201ENST00000303354 PNPT1Q8TCS8 783 aaKnown RBP7.92□□□□□ -1.14
SCN9A-201ENST00000303354 BRINP2Q9C0B6 783 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 EHD4Q9H223 541 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 COQ6Q9Y2Z9 468 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 TET3O43151 1660 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 ZSCAN5CA6NGD5 496 aaPredicted RBP7.91□□□□□ -1.14
SCN9A-201ENST00000303354 CHUKO15111 745 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 PAPSS1O43252 624 aaPredicted RBP7.91□□□□□ -1.14
SCN9A-201ENST00000303354 ZMPSTE24O75844 475 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 ALBP02768 609 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 TGFB3P10600 412 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 MICU2Q8IYU8 434 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 KLRG1Q96E93 195 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 RBBP8Q99708 897 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 POLR1EQ9GZS1 481 aaKnown RBP7.91□□□□□ -1.14
SCN9A-201ENST00000303354 ATG10Q9H0Y0 220 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 OLFML3Q9NRN5 406 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 FAM153AQ9UHL3 310 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 MTSS1O43312 755 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 LBPP18428 481 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 CORO1AP31146 461 aaKnown RBP7.91□□□□□ -1.14
SCN9A-201ENST00000303354 HOXA7P31268 230 aaPredicted RBP7.91□□□□□ -1.14
SCN9A-201ENST00000303354 CD151P48509 253 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 SLC1A6P48664 564 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 GPR15P49685 360 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 RENBPP51606 427 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 TAF10Q12962 218 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 KIAA2013Q8IYS2 634 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 FBXO22Q8NEZ5 403 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 GLMNQ92990 594 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 SMG9Q9H0W8 520 aaKnown RBP7.91□□□□□ -1.14
SCN9A-201ENST00000303354 ENTPD4Q9Y227 616 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 TRUB2O95900 331 aaKnown RBP7.91□□□□□ -1.14
SCN9A-201ENST00000303354 PIGZQ86VD9 579 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 CYP4Z1Q86W10 505 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 LNX2Q8N448 690 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.91□□□□□ -1.14
SCN9A-201ENST00000303354 ACTL9Q8TC94 416 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 SETD7Q8WTS6 366 aaKnown RBP7.91□□□□□ -1.14
SCN9A-201ENST00000303354 RAD51AP1Q96B01 352 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 PAWRQ96IZ0 340 aaKnown RBP7.91□□□□□ -1.14
SCN9A-201ENST00000303354 ACO2Q99798 780 aaKnown RBP7.91□□□□□ -1.14
SCN9A-201ENST00000303354 KRCC1Q9NPI7 259 aaPredicted RBP7.91□□□□□ -1.14
SCN9A-201ENST00000303354 TOR4AQ9NXH8 423 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 ABCA6Q8N139 1617 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 ABHD14A-ACY1A0A1B0GW23 586 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 PSTPIP1O43586 416 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 MSCO60682 206 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 AGTP01019 485 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 CCL5P13501 91 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 PPP3CAQ08209 521 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 MINDY4Q4G0A6 757 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 FBXO15Q8NCQ5 510 aaPredicted RBP7.91□□□□□ -1.14
SCN9A-201ENST00000303354 ENGASEQ8NFI3 743 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 THAP11Q96EK4 314 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 DDX20Q9UHI6 824 aaKnown RBP7.91□□□□□ -1.14
SCN9A-201ENST00000303354 ARL2BPQ9Y2Y0 163 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 TRIM43BA6NCK2 446 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 INMTO95050 263 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 NPY2RP49146 381 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms