RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 BTBD10Q9BSF8 475 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 PRRG4Q9BZD6 226 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 KCNH7Q9NS40 1196 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 ARL15Q9NXU5 204 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 ERGIC3Q9Y282 383 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 CNTNAP2Q9UHC6 1331 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 FAM205CA6NFA0 338 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 SCN2BO60939 215 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 SERPINA1P01009 418 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 DBTP11182 482 aaKnown RBP10.54□□□□□ -0.72
CLIP1-201ENST00000302528 ADRA2BP18089 450 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 RAP1GAPP47736 663 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 SMU1Q2TAY7 513 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 USP41Q3LFD5 358 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 XRRA1Q6P2D8 792 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 TFAP2DQ7Z6R9 452 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 TRAPPC5Q8IUR0 188 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 EMC1Q8N766 993 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 EFCAB3Q8N7B9 438 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 SLC25A23Q9BV35 468 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 SPATA5L1Q9BVQ7 753 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 TNKS2Q9H2K2 1166 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 C17orf75Q9HAS0 396 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 SPG21Q9NZD8 308 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 NYAP2Q9P242 653 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 KDM6AO15550 1401 aaPredicted RBP10.54□□□□□ -0.72
CLIP1-201ENST00000302528 GTPBP1O00178 669 aaKnown RBP10.54□□□□□ -0.72
CLIP1-201ENST00000302528 KPNA3O00505 521 aaPredicted RBP10.54□□□□□ -0.72
CLIP1-201ENST00000302528 PRKAR1AP10644 381 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 RPA1P27694 616 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 OR1E1P30953 314 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 SNX32Q86XE0 403 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 ZC3H7AQ8IWR0 971 aaKnown RBP10.54□□□□□ -0.72
CLIP1-201ENST00000302528 KBTBD8Q8NFY9 601 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 PMM1Q92871 262 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 MYDGFQ969H8 173 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 CRELD1Q96HD1 420 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 CDRT15Q96T59 188 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 AGPAT3Q9NRZ7 376 aa10.54□□□□□ -0.72
CLIP1-201ENST00000302528 GSAPA4D1B5 854 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 TEX46H3BTG2 121 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 NTRK1P04629 796 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 EPORP19235 508 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 RPL9P32969 192 aaKnown RBP10.53□□□□□ -0.72
CLIP1-201ENST00000302528 GP5P40197 560 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 NFIAQ12857 509 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 PLD1Q13393 1074 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 FRG1Q14331 258 aaKnown RBP10.53□□□□□ -0.72
CLIP1-201ENST00000302528 NFE2Q16621 373 aaPredicted RBP10.53□□□□□ -0.72
CLIP1-201ENST00000302528 INSCQ1MX18 579 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 ANGEL2Q5VTE6 544 aaKnown RBP10.53□□□□□ -0.72
CLIP1-201ENST00000302528 ZNF470Q6ECI4 717 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 THOC7Q6I9Y2 204 aaKnown RBP10.53□□□□□ -0.72
CLIP1-201ENST00000302528 DENND5AQ6IQ26 1287 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 MPZL3Q6UWV2 235 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 TC2NQ8N9U0 490 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 FAIM2Q9BWQ8 316 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 ZNF518BQ9C0D4 1074 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 CCDC177Q9NQR7 707 aaPredicted RBP10.53□□□□□ -0.72
CLIP1-201ENST00000302528 PRDM8Q9NQV8 689 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.53□□□□□ -0.72
CLIP1-201ENST00000302528 MAT2BQ9NZL9 334 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 IKZF3Q9UKT9 509 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 ANKRD6Q9Y2G4 727 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 IFNA6P05013 189 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 SLC26A3P40879 764 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 HSF2Q03933 536 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 UTS2BQ765I0 119 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 FAM192AQ9GZU8 254 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 POMKQ9H5K3 350 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 LRCH1Q9Y2L9 728 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 TMEM94Q12767 1356 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 PPRC1Q5VV67 1664 aaKnown RBP10.53□□□□□ -0.72
CLIP1-201ENST00000302528 FCHO1O14526 889 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 GYPCP04921 128 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 TBX4P57082 545 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 BCL2L1Q07817 233 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 MCL1Q07820 350 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 EPHA10Q5JZY3 1008 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 PRR23CQ6ZRP0 262 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 ATCAYQ86WG3 371 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 POU5F2Q8N7G0 328 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 PSMA8Q8TAA3 256 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 AP3S1Q92572 193 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 OXNAD1Q96HP4 312 aaPredicted RBP10.53□□□□□ -0.72
CLIP1-201ENST00000302528 INTS7Q9NVH2 962 aaKnown RBP10.53□□□□□ -0.72
CLIP1-201ENST00000302528 WBP11Q9Y2W2 641 aaKnown RBP10.53□□□□□ -0.72
CLIP1-201ENST00000302528 ALKQ9UM73 1620 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 PNPLA7Q6ZV29 1317 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 PGRMC2O15173 223 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 SGTAO43765 313 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 PDHBP11177 359 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 FGFR3P22607 806 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 FMO4P31512 558 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 UGT1A5P35504 534 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 MEIOBQ8N635 442 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 CCDC54Q8NEL0 328 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 RXFP2Q8WXD0 754 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 ASB2Q96Q27 587 aa10.53□□□□□ -0.72
CLIP1-201ENST00000302528 THAP1Q9NVV9 213 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms