RNA–Protein interactions for RNA: ENST00000299259.10

COPS2-201, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 1 (best) BASIC

Gene COPS2, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-201ENST00000299259 C5orf22Q49AR2 442 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 PABPC1LQ4VXU2 614 aaKnown RBP10.72□□□□□ -0.69
COPS2-201ENST00000299259 NAPEPLDQ6IQ20 393 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 ZNF354CQ86Y25 554 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 KLHDC8BQ8IXV7 354 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 SRRM1Q8IYB3 904 aaKnown RBP10.72□□□□□ -0.69
COPS2-201ENST00000299259 CYP4X1Q8N118 509 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 KREMEN2Q8NCW0 462 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 AZIN2Q96A70 460 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 MRRFQ96E11 262 aaKnown RBP10.72□□□□□ -0.69
COPS2-201ENST00000299259 PRICKLE1Q96MT3 831 aaPredicted RBP10.72□□□□□ -0.69
COPS2-201ENST00000299259 LBHD1Q9BQE6 289 aaPredicted RBP10.72□□□□□ -0.69
COPS2-201ENST00000299259 NAT9Q9BTE0 207 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 GLOD4Q9HC38 313 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 TLR9Q9NR96 1032 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 SMPD4Q9NXE4 827 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 ACTL7BQ9Y614 415 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 LINC01553A4QN01 128 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 PSMD3O43242 534 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 CACNG3O60359 315 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 USP12O75317 370 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 PIAS1O75925 651 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 ANXA9O76027 345 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 KLKB1P03952 638 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 PGAM1P18669 254 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 KRT15P19012 456 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 GABRR2P28476 465 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 MSH2P43246 934 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 YBEYP58557 167 aaPredicted RBP10.72□□□□□ -0.69
COPS2-201ENST00000299259 ERVFC1P60507 584 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 CRADDP78560 199 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 PPARDQ03181 441 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 OLIG2Q13516 323 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 KBTBD12Q3ZCT8 623 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 STEAP4Q687X5 459 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 LILRA6Q6PI73 481 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 OTOP3Q7RTS5 596 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 CCNJLQ8IV13 435 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 CFAP52Q8N1V2 620 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 ELMOD1Q8N336 334 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 OR52K1Q8NGK4 314 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 NSMCE1Q8WV22 266 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 MRPS31Q92665 395 aaKnown RBP10.72□□□□□ -0.69
COPS2-201ENST00000299259 OXNAD1Q96HP4 312 aaPredicted RBP10.72□□□□□ -0.69
COPS2-201ENST00000299259 GCNAQ96QF7 691 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 FCRL5Q96RD9 977 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 DDX50Q9BQ39 737 aaKnown RBP10.72□□□□□ -0.69
COPS2-201ENST00000299259 TRIM56Q9BRZ2 755 aaKnown RBP10.72□□□□□ -0.69
COPS2-201ENST00000299259 HTATIP2Q9BUP3 242 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 RETREG1Q9H6L5 497 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 PLAC1Q9HBJ0 212 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 CASS4Q9NQ75 786 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 GKN1Q9NS71 199 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 RBM22Q9NW64 420 aaKnown RBP eCLIP10.72□□□□□ -0.69
COPS2-201ENST00000299259 SYBUQ9NX95 663 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 SENP1Q9P0U3 644 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 SAMD15Q9P1V8 674 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 AAR2Q9Y312 384 aaKnown RBP10.72□□□□□ -0.69
COPS2-201ENST00000299259 PCDHA11Q9Y5I1 949 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 IKBKGQ9Y6K9 419 aa10.72□□□□□ -0.69
COPS2-201ENST00000299259 ANKRD36A6QL64 1941 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 C2orf71A6NGG8 1288 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 HIDE1A8MVS5 230 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 TRDMT1O14717 391 aaKnown RBP10.71□□□□□ -0.69
COPS2-201ENST00000299259 LATS1O95835 1130 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 PEX11BO96011 259 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 INHBAP08476 426 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 CHN1P15882 459 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 PRKCHP24723 683 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 LSP1P33241 339 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 IFNAR2P48551 515 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 RENBPP51606 427 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 CDH4P55283 916 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 SMAD3P84022 425 aaKnown RBP10.71□□□□□ -0.69
COPS2-201ENST00000299259 CYP4F8P98187 520 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 HNRNPDQ14103 355 aaKnown RBP10.71□□□□□ -0.69
COPS2-201ENST00000299259 LEKR1Q6ZMV7 388 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 LINC00523Q86TU6 105 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 TRABD2AQ86V40 505 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 TMC8Q8IU68 726 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.71□□□□□ -0.69
COPS2-201ENST00000299259 DNAAF3Q8N9W5 541 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 DCAKDQ8WVC6 231 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 POF1BQ8WVV4 589 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 SLC44A1Q8WWI5 657 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 PABPC5Q96DU9 382 aaKnown RBP10.71□□□□□ -0.69
COPS2-201ENST00000299259 ZFRQ96KR1 1074 aaKnown RBP10.71□□□□□ -0.69
COPS2-201ENST00000299259 SLC22A12Q96S37 553 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 UBP1Q9NZI7 540 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 BFARQ9NZS9 450 aa10.71□□□□□ -0.69
COPS2-201ENST00000299259 AGO1Q9UL18 857 aaKnown RBP10.71□□□□□ -0.69
COPS2-201ENST00000299259 ZFP37Q9Y6Q3 630 aaPredicted RBP10.71□□□□□ -0.69
COPS2-201ENST00000299259 TMEM120BA0PK00 339 aa10.7□□□□□ -0.7
COPS2-201ENST00000299259 FOXO6A8MYZ6 492 aa10.7□□□□□ -0.7
COPS2-201ENST00000299259 J3KR12 359 aa10.7□□□□□ -0.7
COPS2-201ENST00000299259 AP3B1O00203 1094 aa10.7□□□□□ -0.7
COPS2-201ENST00000299259 LPXNO60711 386 aa10.7□□□□□ -0.7
COPS2-201ENST00000299259 C1QAP02745 245 aa10.7□□□□□ -0.7
COPS2-201ENST00000299259 BRAFP15056 766 aa10.7□□□□□ -0.7
COPS2-201ENST00000299259 GEMP55040 296 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms