RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 ERI1Q8IV48 349 aaKnown RBP15.9■□□□□ 0.14
UBAP1-201ENST00000297661 CROCCP3Q8IVE0 287 aa15.9■□□□□ 0.14
UBAP1-201ENST00000297661 WDR75Q8IWA0 830 aaKnown RBP15.9■□□□□ 0.14
UBAP1-201ENST00000297661 PPP1R14CQ8TAE6 165 aa15.9■□□□□ 0.14
UBAP1-201ENST00000297661 TBCBQ99426 244 aa15.9■□□□□ 0.14
UBAP1-201ENST00000297661 ZNF670Q9BS34 389 aa15.9■□□□□ 0.14
UBAP1-201ENST00000297661 MAF1Q9H063 256 aa15.9■□□□□ 0.14
UBAP1-201ENST00000297661 GOLGA2P5Q9HBQ8 144 aa15.9■□□□□ 0.14
UBAP1-201ENST00000297661 DTLQ9NZJ0 730 aa15.9■□□□□ 0.14
UBAP1-201ENST00000297661 CITO14578 2027 aa15.9■□□□□ 0.14
UBAP1-201ENST00000297661 ALDH1A1P00352 501 aa15.9■□□□□ 0.14
UBAP1-201ENST00000297661 MTTPP55157 894 aa15.9■□□□□ 0.14
UBAP1-201ENST00000297661 RARS2Q5T160 578 aaKnown RBP15.9■□□□□ 0.14
UBAP1-201ENST00000297661 HEATR6Q6AI08 1181 aaKnown RBP15.9■□□□□ 0.14
UBAP1-201ENST00000297661 GRAMD4Q6IC98 578 aa15.9■□□□□ 0.14
UBAP1-201ENST00000297661 NFKBIZQ9BYH8 718 aa15.9■□□□□ 0.14
UBAP1-201ENST00000297661 THAP1Q9NVV9 213 aa15.9■□□□□ 0.14
UBAP1-201ENST00000297661 GNEQ9Y223 722 aaKnown RBP15.9■□□□□ 0.14
UBAP1-201ENST00000297661 A0A1B0GTW7 788 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 KANSL1LA0AUZ9 987 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 DPYSL4O14531 572 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 ZMPSTE24O75844 475 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 BPGMP07738 259 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 PPM1JQ5JR12 505 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 LGSNQ5TDP6 509 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 CDKL3Q8IVW4 592 aaPredicted RBP15.89■□□□□ 0.13
UBAP1-201ENST00000297661 FAM149B1Q96BN6 582 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 LRGUKQ96M69 825 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 ZNF778Q96MU6 729 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 NXF3Q9H4D5 531 aaKnown RBP15.89■□□□□ 0.13
UBAP1-201ENST00000297661 SETD4Q9NVD3 440 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 ZNF180Q9UJW8 692 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 DNAJC16Q9Y2G8 782 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 SLC45A1Q9Y2W3 748 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 FAM159BA6NKW6 160 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 H3BRB1 525 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 MGAT1P26572 445 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 ABCG1P45844 678 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 CLCN2P51788 898 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 NAA20P61599 178 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 SP3Q02447 781 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 FAM110CQ1W6H9 321 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 NCBP2-AS2Q69YL0 99 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 TAPT1Q6NXT6 567 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 POTEHQ6S545 545 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 PACS1Q6VY07 963 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 FRMD7Q6ZUT3 714 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 LINC01465Q8N7H1 131 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 PIWIL2Q8TC59 973 aaKnown RBP15.89■□□□□ 0.13
UBAP1-201ENST00000297661 TUT1Q9H6E5 874 aaKnown RBP15.89■□□□□ 0.13
UBAP1-201ENST00000297661 PACSIN3Q9UKS6 424 aa15.89■□□□□ 0.13
UBAP1-201ENST00000297661 TRDMT1O14717 391 aaKnown RBP15.88■□□□□ 0.13
UBAP1-201ENST00000297661 MDM4O15151 490 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 BIRC5O15392 142 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 ENTPD1P49961 510 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 CCR3P51677 355 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 FASTKD1Q53R41 847 aaKnown RBP15.88■□□□□ 0.13
UBAP1-201ENST00000297661 MARCH8Q5T0T0 291 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 ATG14Q6ZNE5 492 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 RSPH3Q86UC2 560 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 RAB3IL1Q8TBN0 382 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 SLC2A14Q8TDB8 520 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 TFB1MQ8WVM0 346 aaKnown RBP15.88■□□□□ 0.13
UBAP1-201ENST00000297661 C16orf70Q9BSU1 422 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 PLGRKTQ9HBL7 147 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 RRN3Q9NYV6 651 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 TPP1O14773 563 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 MFSD11O43934 449 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 USP12O75317 370 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 FBXO21O94952 628 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 THRAP10827 490 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 MAGEA3P43357 314 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 C16orf72Q14CZ0 275 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 PDK1Q15118 436 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 MAMDC4Q6UXC1 1216 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.88■□□□□ 0.13
UBAP1-201ENST00000297661 CCNYQ8ND76 341 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 GIPC3Q8TF64 312 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 CMTM5Q96DZ9 223 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 CORO1BQ9BR76 489 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 ZNF358Q9NW07 568 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 KIAA1257Q9ULG3 409 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 GABRQQ9UN88 632 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 PCDHA11Q9Y5I1 949 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 TNPO2O14787 897 aaKnown RBP15.88■□□□□ 0.13
UBAP1-201ENST00000297661 SPTLC1O15269 473 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 E2F6O75461 281 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 GCATO75600 419 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 ALDOAP04075 364 aaKnown RBP15.88■□□□□ 0.13
UBAP1-201ENST00000297661 ZNF24P17028 368 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 HOXA11P31270 313 aaPredicted RBP15.88■□□□□ 0.13
UBAP1-201ENST00000297661 CDKL1Q00532 357 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 GRIK4Q16099 956 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 DPYSL2Q16555 572 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 N4BP2L1Q5TBK1 243 aaPredicted RBP15.88■□□□□ 0.13
UBAP1-201ENST00000297661 GPR142Q7Z601 462 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 GALNT4Q8N4A0 578 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 COLGALT1Q8NBJ5 622 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 HTR3CQ8WXA8 447 aa15.88■□□□□ 0.13
UBAP1-201ENST00000297661 TMIGD2Q96BF3 282 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms