RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 MANSC4A6NHS7 340 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 ARHGAP42A6NI28 874 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 YJEFN3A6XGL0 299 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 CLDN5O00501 218 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 NRP1O14786 923 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 TREHO43280 583 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 BEST1O76090 585 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 NCAM1P13591 858 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 HOXC13P31276 330 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 CLCN2P51788 898 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 PITX1P78337 314 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 DSG1Q02413 1049 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 HERC3Q15034 1050 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 SH2D4BQ5SQS7 431 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 PGM2L1Q6PCE3 622 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 ZYG11AQ6WRX3 759 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 METTL23Q86XA0 190 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 ARRDC4Q8NCT1 418 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 PDCD6IPQ8WUM4 868 aaKnown RBP10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 FATE1Q969F0 183 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 PANX3Q96QZ0 392 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 HAPLN3Q96S86 360 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 ACBD6Q9BR61 282 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 MLPHQ9BV36 600 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 ILKAPQ9H0C8 392 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 GOLGA2P5Q9HBQ8 144 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 OXSMQ9NWU1 459 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 ZDHHC7Q9NXF8 308 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 HACD3Q9P035 362 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 OR12D3Q9UGF7 316 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 RAP2CQ9Y3L5 183 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 TRPV2Q9Y5S1 764 aa10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 ZNF638Q14966 1978 aaKnown RBP10.2□□□□□ -0.78
TNFRSF11B-201ENST00000297350 A0A088AWK7 358 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 HHLA1C9JL84 531 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 G3V2L1 256 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 KCNK1O00180 336 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 ZBTB24O43167 697 aaPredicted RBP10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 LYPLA1O75608 230 aaPredicted RBP10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 CYP11A1P05108 521 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 MYL3P08590 195 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 CRABP2P29373 138 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 CD68P34810 354 aaPredicted RBP10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 CPA2P48052 419 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 PSEN1P49768 467 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 NDUFV1P49821 464 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 SESN3P58005 492 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 PRKAA1Q13131 559 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 ITGA9Q13797 1035 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 UBAP2LQ14157 1087 aaKnown RBP10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 PCID2Q5JVF3 399 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 LIPMQ5VYY2 423 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 TIGD7Q6NT04 549 aaPredicted RBP10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 POTEHQ6S545 545 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 HFE2Q6ZVN8 426 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 NRG4Q8WWG1 115 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 SPDL1Q96EA4 605 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 PCED1BQ96HM7 432 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 VPS39Q96JC1 886 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 UROC1Q96N76 676 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 FCRL5Q96RD9 977 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 PRKD2Q9BZL6 878 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 UBE2OQ9C0C9 1292 aaKnown RBP10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 ZNF395Q9H8N7 513 aaPredicted RBP10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 DMAP1Q9NPF5 467 aaPredicted RBP10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 C20orf96Q9NUD7 363 aaPredicted RBP10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 FAM105AQ9NUU6 356 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 PDP2Q9P2J9 529 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 SYNJ2BP-COX16A0A087WUM0 186 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 C2P06681 752 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 THRAP10827 490 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 PAMP19021 973 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 NFKB1P19838 968 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 GEMP55040 296 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 NRG1Q02297 640 aaPredicted RBP10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 SLC12A1Q13621 1099 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 CST9Q5W186 159 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 MRPL10Q7Z7H8 261 aaKnown RBP10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 TMEM126BQ8IUX1 230 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 SERPINI1Q99574 410 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 DRC3Q9H069 523 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 CATSPERBQ9H7T0 1116 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 S100A14Q9HCY8 104 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 IL1RAPL1Q9NZN1 696 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 COX16Q9P0S2 106 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 VPS28Q9UK41 221 aa10.19□□□□□ -0.78
TNFRSF11B-201ENST00000297350 FAM72CH0Y354 149 aa10.18□□□□□ -0.78
TNFRSF11B-201ENST00000297350 HDAC3O15379 428 aa10.18□□□□□ -0.78
TNFRSF11B-201ENST00000297350 DDHD2O94830 711 aa10.18□□□□□ -0.78
TNFRSF11B-201ENST00000297350 IGLV3-25P01717 112 aa10.18□□□□□ -0.78
TNFRSF11B-201ENST00000297350 MYCNP04198 464 aaPredicted RBP10.18□□□□□ -0.78
TNFRSF11B-201ENST00000297350 HNRNPDQ14103 355 aaKnown RBP10.18□□□□□ -0.78
TNFRSF11B-201ENST00000297350 FSCN1Q16658 493 aaKnown RBP10.18□□□□□ -0.78
TNFRSF11B-201ENST00000297350 FAM72AQ5TYM5 149 aa10.18□□□□□ -0.78
TNFRSF11B-201ENST00000297350 FAM72DQ6L9T8 149 aa10.18□□□□□ -0.78
TNFRSF11B-201ENST00000297350 PKN3Q6P5Z2 889 aa10.18□□□□□ -0.78
TNFRSF11B-201ENST00000297350 FAM171BQ6P995 826 aa10.18□□□□□ -0.78
TNFRSF11B-201ENST00000297350 C16orf89Q6UX73 402 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms