RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 HEATR4Q86WZ0 1026 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 GALNT15Q8N3T1 639 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 SERAC1Q96JX3 654 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 MBOAT7Q96N66 472 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 NR1H4Q96RI1 486 aaPredicted RBP13.66□□□□□ -0.22
HPS3-201ENST00000296051 WRAP73Q9P2S5 460 aaPredicted RBP13.66□□□□□ -0.22
HPS3-201ENST00000296051 ROBO3Q96MS0 1386 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 TMEM191CA6NGB0 347 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 TM7SF2O76062 418 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 HDCP19113 662 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 PSMA4P25789 261 aaKnown RBP13.66□□□□□ -0.22
HPS3-201ENST00000296051 HMOX2P30519 316 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 CCR1P32246 355 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 RGS4P49798 205 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 TAF5Q15542 800 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 TXNRD3NBQ6F5E7 133 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 PHACTR4Q8IZ21 702 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 HTR3CQ8WXA8 447 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 TLE6Q9H808 572 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 RNF103O00237 685 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 CLOCKO15516 846 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 MTSS1O43312 755 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 FBXO21O94952 628 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 FDFT1P37268 417 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 ZNF284Q2VY69 593 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 PPM1JQ5JR12 505 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 RUBCNLQ9H714 662 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 PRKAG3Q9UGI9 489 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 VANGL2Q9ULK5 521 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 MYRFQ9Y2G1 1151 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 SF3B1O75533 1304 aaKnown RBP eCLIP13.65□□□□□ -0.22
HPS3-201ENST00000296051 UBDO15205 165 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 ALDH1A2O94788 518 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 ADH1AP07327 375 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 SNHG28P0DPA3 235 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 PPP3CCP48454 512 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 PLPP4Q5VZY2 271 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 HERC6Q8IVU3 1022 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 FRMD8P1Q9BZ68 369 aaPredicted RBP13.65□□□□□ -0.22
HPS3-201ENST00000296051 STN1Q9H668 368 aaKnown RBP13.65□□□□□ -0.22
HPS3-201ENST00000296051 NMRAL1Q9HBL8 299 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 RRN3Q9NYV6 651 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 LGALS13Q9UHV8 139 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 PSMD3O43242 534 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 DAB1O75553 588 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 NPM3O75607 178 aaKnown RBP13.65□□□□□ -0.22
HPS3-201ENST00000296051 CST3P01034 146 aaPredicted RBP13.65□□□□□ -0.22
HPS3-201ENST00000296051 FESP07332 822 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 UQCRBP14927 111 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 AQP4P55087 323 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 ABCE1P61221 599 aaKnown RBP13.65□□□□□ -0.22
HPS3-201ENST00000296051 TRAF2Q12933 501 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 NAPEPLDQ6IQ20 393 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 PRR23CQ6ZRP0 262 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 FBXW8Q8N3Y1 598 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 FAM156AQ8NDB6 213 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 TSPAN14Q8NG11 270 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 CAB39LQ9H9S4 337 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 SLC27A5Q9Y2P5 690 aa13.65□□□□□ -0.22
HPS3-201ENST00000296051 MYH13Q9UKX3 1938 aa13.65□□□□□ -0.23
HPS3-201ENST00000296051 HEATR9A2RTY3 570 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 ZNF839A8K0R7 811 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 TIMM44O43615 452 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 VAPBO95292 243 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 SYN1P17600 705 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 PBLDP30039 288 aaPredicted RBP13.64□□□□□ -0.23
HPS3-201ENST00000296051 AMIGO3Q86WK7 504 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 BRSK2Q8IWQ3 736 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 RIN3Q8TB24 985 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 SMARCD1Q96GM5 515 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 FAXDC2Q96IV6 333 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 LGMNQ99538 433 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 ATP13A1Q9HD20 1204 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 NCKIPSDQ9NZQ3 722 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 RABGEF1Q9UJ41 708 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 AP4S1Q9Y587 144 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 CNTRLQ7Z7A1 2325 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 TRPC5OSA6NMA1 111 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 SERPINA6P08185 405 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 OR1E1P30953 314 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 YWHAZP63104 245 aaKnown RBP13.64□□□□□ -0.23
HPS3-201ENST00000296051 CDC16Q13042 620 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 PABPC1LQ4VXU2 614 aaKnown RBP13.64□□□□□ -0.23
HPS3-201ENST00000296051 RNASEH2BQ5TBB1 312 aaKnown RBP13.64□□□□□ -0.23
HPS3-201ENST00000296051 MFSD4BQ5TF39 518 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 UNC5AQ6ZN44 842 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 CCDC149Q6ZUS6 474 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 OR52K1Q8NGK4 314 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 UBE2OQ9C0C9 1292 aaKnown RBP13.64□□□□□ -0.23
HPS3-201ENST00000296051 ELOVL4Q9GZR5 314 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 S100A14Q9HCY8 104 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 SLC7A8Q9UHI5 535 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 UBIAD1Q9Y5Z9 338 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 PDZK1P1A8MUH7 402 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 SUPT3HB4E1H0 165 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 PTGES3LE9PB15 166 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 AP3B1O00203 1094 aa13.64□□□□□ -0.23
HPS3-201ENST00000296051 HSPA1AP0DMV8 641 aaKnown RBP13.64□□□□□ -0.23
HPS3-201ENST00000296051 HSPA1BP0DMV9 641 aaKnown RBP13.64□□□□□ -0.23
HPS3-201ENST00000296051 CCDC85BQ15834 202 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms