RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 OLFML2BQ68BL8 750 aa17.99■□□□□ 0.47
CDC42EP3-201ENST00000295324 OR56A4Q8NGH8 313 aa17.99■□□□□ 0.47
CDC42EP3-201ENST00000295324 PHF21BQ96EK2 531 aa17.99■□□□□ 0.47
CDC42EP3-201ENST00000295324 CYP51A1Q16850 503 aa17.99■□□□□ 0.47
CDC42EP3-201ENST00000295324 EME1Q96AY2 570 aa17.99■□□□□ 0.47
CDC42EP3-201ENST00000295324 RIPOR3Q96MK2 946 aa17.99■□□□□ 0.47
CDC42EP3-201ENST00000295324 XRN1Q8IZH2 1706 aaKnown RBP17.99■□□□□ 0.47
CDC42EP3-201ENST00000295324 NFKB1P19838 968 aa17.99■□□□□ 0.47
CDC42EP3-201ENST00000295324 CLCNKBP51801 687 aa17.99■□□□□ 0.47
CDC42EP3-201ENST00000295324 GRM3Q14832 879 aa17.99■□□□□ 0.47
CDC42EP3-201ENST00000295324 CRY1Q16526 586 aa17.99■□□□□ 0.47
CDC42EP3-201ENST00000295324 CEP68Q76N32 757 aa17.99■□□□□ 0.47
CDC42EP3-201ENST00000295324 SLC44A2Q8IWA5 706 aaPredicted RBP17.99■□□□□ 0.47
CDC42EP3-201ENST00000295324 AGO1Q9UL18 857 aaKnown RBP17.99■□□□□ 0.47
CDC42EP3-201ENST00000295324 PADI4Q9UM07 663 aa17.99■□□□□ 0.47
CDC42EP3-201ENST00000295324 BTN3A1O00481 513 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 OR4Q2P0C623 313 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 BBS12Q6ZW61 710 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 FAM126AQ9BYI3 521 aaPredicted RBP17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 CDHR5Q9HBB8 845 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 CCL16O15467 120 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 C22orf31O95567 290 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 CLTBP09497 229 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 GOT1P17174 413 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 SSTR1P30872 391 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 PFKPQ01813 784 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 PGS1Q32NB8 556 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 C10orf53Q8N6V4 93 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 RSPH1Q8WYR4 309 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 PPP1R10Q96QC0 940 aaKnown RBP17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 NAALADL1Q9UQQ1 740 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 A0A1W2PQH9 124 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 IFNA14P01570 189 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 AMD1P17707 334 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 BMP6P22004 513 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 NUDT2P50583 147 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 N4BP2L1Q5TBK1 243 aaPredicted RBP17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 CTU1Q7Z7A3 348 aaKnown RBP17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 CERS4Q9HA82 394 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 SHPRHQ149N8 1683 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 NCANO14594 1321 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 GRM6O15303 877 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 TBC1D4O60343 1298 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 TRIM13O60858 407 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 PEX6Q13608 980 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 ATP6AP1LQ52LC2 224 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 C1orf127Q8N9H9 656 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 IRGQQ8WZA9 623 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 SNX27Q96L92 541 aa17.98■□□□□ 0.47
CDC42EP3-201ENST00000295324 NEDD8-MDP1E9PL57 170 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 FSTL1Q12841 308 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 CNGA3Q16281 694 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 MARK2Q7KZI7 788 aaKnown RBP17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 KRT78Q8N1N4 520 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 ZNF384Q8TF68 577 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 TMBIM4Q9HC24 238 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 ZNF112Q9UJU3 913 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 RIPK2O43353 540 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 SKIV2L2P42285 1042 aaKnown RBP17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 KDM7AQ6ZMT4 941 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 BAP1Q92560 729 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 TADA1Q96BN2 335 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 ARL15Q9NXU5 204 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 PAGE1O75459 146 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 PTPN2P17706 415 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 PLIN5Q00G26 463 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 PAGE2BQ5JRK9 111 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 OR52K1Q8NGK4 314 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 ARNTL2Q8WYA1 636 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 CPSF4O95639 269 aaKnown RBP17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 C4BPAP04003 597 aaKnown RBP17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 SLC2A4P14672 509 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 TTPAP49638 278 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 ZCCHC9Q8N567 271 aaKnown RBP17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 ZNF655Q8N720 491 aaPredicted RBP17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 KCNV2Q8TDN2 545 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 CAVIN3Q969G5 261 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 CXorf40BQ96DE9 158 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 ZBTB10Q96DT7 871 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 TCF25Q9BQ70 676 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 GMIPQ9P107 970 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 GNPTGQ9UJJ9 305 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 CRYL1Q9Y2S2 319 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 NALCNQ8IZF0 1738 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 C16orf96A6NNT2 1141 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 AP5Z1O43299 807 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 ABL2P42684 1182 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 RPL7AP62424 266 aaKnown RBP17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 AFTPHQ6ULP2 937 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 MILR1Q7Z6M3 343 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 ELMO1Q92556 727 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 GTF2IRD1Q9UHL9 959 aa17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 TNPO3Q9Y5L0 923 aaKnown RBP17.97■□□□□ 0.47
CDC42EP3-201ENST00000295324 BTNL10A8MVZ5 291 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 FLOT2Q14254 428 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 POM121L1PQ3SYA9 428 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 LYPLAL1Q5VWZ2 237 aa17.96■□□□□ 0.47
CDC42EP3-201ENST00000295324 NPNTQ6UXI9 565 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms