RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 MYL9P24844 172 aa12.62□□□□□ -0.39
SLX4-201ENST00000294008 KCNA10Q16322 511 aa12.62□□□□□ -0.39
SLX4-201ENST00000294008 TCHHL1Q5QJ38 904 aaPredicted RBP12.62□□□□□ -0.39
SLX4-201ENST00000294008 MARC1Q5VT66 337 aa12.62□□□□□ -0.39
SLX4-201ENST00000294008 PSRC1Q6PGN9 363 aaPredicted RBP12.62□□□□□ -0.39
SLX4-201ENST00000294008 CES3Q6UWW8 571 aa12.62□□□□□ -0.39
SLX4-201ENST00000294008 DEF8Q6ZN54 512 aa12.62□□□□□ -0.39
SLX4-201ENST00000294008 HDDC3Q8N4P3 179 aa12.62□□□□□ -0.39
SLX4-201ENST00000294008 METTL6Q8TCB7 284 aa12.62□□□□□ -0.39
SLX4-201ENST00000294008 SMURF1Q9HCE7 757 aa12.62□□□□□ -0.39
SLX4-201ENST00000294008 NECTIN3Q9NQS3 549 aa12.62□□□□□ -0.39
SLX4-201ENST00000294008 H3BNH8 94 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 PNMA6AP0CW24 399 aaPredicted RBP12.61□□□□□ -0.39
SLX4-201ENST00000294008 IKBKEQ14164 716 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 ACAP1Q15027 740 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 HIPK1Q86Z02 1210 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 ZNF366Q8N895 744 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 LMLNQ96KR4 655 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 APOL4Q9BPW4 351 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 ACAT2Q9BWD1 397 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 MROH8Q9H579 483 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 HMX1Q9NP08 348 aaPredicted RBP12.61□□□□□ -0.39
SLX4-201ENST00000294008 DCP1AQ9NPI6 582 aaPredicted RBP12.61□□□□□ -0.39
SLX4-201ENST00000294008 IMP3Q9NV31 184 aaKnown RBP12.61□□□□□ -0.39
SLX4-201ENST00000294008 PCDHGA6Q9Y5G7 932 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 PLEKHG2Q9H7P9 1386 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 TRAV19A0A0A6YYK7 116 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 CYB5AP00167 134 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 APOC1P02654 83 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 TAB1Q15750 504 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 PDCD4Q53EL6 469 aaKnown RBP12.61□□□□□ -0.39
SLX4-201ENST00000294008 PAGE2BQ5JRK9 111 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 C11orf63Q6NUN7 778 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 ZNF613Q6PF04 617 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 STK32CQ86UX6 486 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 KBTBD2Q8IY47 623 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 SPATA20Q8TB22 786 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 FBXO30Q8TB52 745 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 HAVCR1Q96D42 359 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 FEM1CQ96JP0 617 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 MRPL9Q9BYD2 267 aaKnown RBP12.61□□□□□ -0.39
SLX4-201ENST00000294008 LAMC3Q9Y6N6 1575 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 THRAP10827 490 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 SLC26A3P40879 764 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 TAS2R41P59536 307 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 HSDL2Q6YN16 418 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 SRBD1Q8N5C6 995 aaKnown RBP12.61□□□□□ -0.39
SLX4-201ENST00000294008 GIPC3Q8TF64 312 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 CDK5RAP1Q96SZ6 601 aaKnown RBP12.61□□□□□ -0.39
SLX4-201ENST00000294008 SYCP2Q9BX26 1530 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 URADA6NGE7 173 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 LCA5LO95447 670 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 RB1P06400 928 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 CYP2R1Q6VVX0 501 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 TMEM199Q8N511 208 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 COPS4Q9BT78 406 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 HGH1Q9BTY7 390 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 SEMA6AQ9H2E6 1030 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 TTC26A0AVF1 554 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 C1QTNF3-AMACRE9PGA6 284 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 GLRA3O75311 464 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 PRH1P02810 166 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 SERPINF2P08697 491 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 ARMC12Q5T9G4 340 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 CST11Q9H112 138 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 KLQ9UEF7 1012 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 COL15A1P39059 1388 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 ERVV-1B6SEH8 477 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 XKRYO14609 159 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 USP11P51784 963 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 POLR2LP62875 67 aaKnown RBP12.61□□□□□ -0.39
SLX4-201ENST00000294008 PURAQ00577 322 aaKnown RBP12.61□□□□□ -0.39
SLX4-201ENST00000294008 BNIP2Q12982 314 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 BEND4Q6ZU67 534 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 OAFQ86UD1 273 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 EXOC3L1Q86VI1 746 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 HCAR2Q8TDS4 363 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 DTNBP1Q96EV8 351 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 TMEM237Q96Q45 408 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 HEY2Q9UBP5 337 aa12.61□□□□□ -0.39
SLX4-201ENST00000294008 SDR42E2A6NKP2 422 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 PLIN3O60664 434 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 BCL10O95999 233 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 THOC7Q6I9Y2 204 aaKnown RBP12.6□□□□□ -0.39
SLX4-201ENST00000294008 TTC7BQ86TV6 843 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 PEX5LQ8IYB4 626 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 ZNF473Q8WTR7 871 aaKnown RBP12.6□□□□□ -0.39
SLX4-201ENST00000294008 TEKT5Q96M29 485 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 C12orf4Q9NQ89 552 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 XPNPEP3Q9NQH7 507 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 ATAD3AQ9NVI7 634 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 PLEKHG1Q9ULL1 1385 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 IGF2BP3O00425 579 aaKnown RBP eCLIP12.6□□□□□ -0.39
SLX4-201ENST00000294008 AGTP01019 485 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 UBXN2BQ14CS0 331 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 CCNYL2Q5T2Q4 361 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 FBXO36Q8NEA4 188 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 PPP1R14BQ96C90 147 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 NSMCE2Q96MF7 247 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 VANGL2Q9ULK5 521 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms