RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 NOD2Q9HC29 1040 aa14.35□□□□□ -0.11
ABCF3-201ENST00000292808 TXLNGQ9NUQ3 528 aa14.35□□□□□ -0.11
ABCF3-201ENST00000292808 CHKBQ9Y259 395 aa14.35□□□□□ -0.11
ABCF3-201ENST00000292808 SEC24AO95486 1093 aa14.35□□□□□ -0.11
ABCF3-201ENST00000292808 TRIP4Q15650 581 aaPredicted RBP14.35□□□□□ -0.11
ABCF3-201ENST00000292808 TEX44Q53QW1 395 aa14.35□□□□□ -0.11
ABCF3-201ENST00000292808 MS4A13Q5J8X5 152 aa14.35□□□□□ -0.11
ABCF3-201ENST00000292808 CHSY1Q86X52 802 aa14.35□□□□□ -0.11
ABCF3-201ENST00000292808 TTC17Q96AE7 1141 aa14.35□□□□□ -0.11
ABCF3-201ENST00000292808 ARMC5Q96C12 935 aa14.35□□□□□ -0.11
ABCF3-201ENST00000292808 PAWRQ96IZ0 340 aaKnown RBP14.35□□□□□ -0.11
ABCF3-201ENST00000292808 C1orf74Q96LT6 269 aa14.35□□□□□ -0.11
ABCF3-201ENST00000292808 LRRC37BQ96QE4 947 aa14.35□□□□□ -0.11
ABCF3-201ENST00000292808 MYLK2Q9H1R3 596 aa14.35□□□□□ -0.11
ABCF3-201ENST00000292808 GBA3Q9H227 469 aa14.35□□□□□ -0.11
ABCF3-201ENST00000292808 PRDM5Q9NQX1 630 aaPredicted RBP14.35□□□□□ -0.11
ABCF3-201ENST00000292808 TLR8Q9NR97 1041 aaKnown RBP14.35□□□□□ -0.11
ABCF3-201ENST00000292808 SLC17A6Q9P2U8 582 aa14.35□□□□□ -0.11
ABCF3-201ENST00000292808 SDR42E2A6NKP2 422 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 FAM159BA6NKW6 160 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 COPEO14579 308 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 NEFHP12036 1026 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 NFKB1P19838 968 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 ETV4P43268 484 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 GJA8P48165 433 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 RPL10AP62906 217 aaKnown RBP14.34□□□□□ -0.11
ABCF3-201ENST00000292808 WLSQ5T9L3 541 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 LGSNQ5TDP6 509 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 MROH9Q5TGP6 573 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 STEAP4Q687X5 459 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 FAM117BQ6P1L5 589 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 MIB1Q86YT6 1006 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 RTL3Q8N8U3 475 aaKnown RBP14.34□□□□□ -0.11
ABCF3-201ENST00000292808 TEKT5Q96M29 485 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 TSGA13Q96PP4 275 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 COMMD8Q9NX08 183 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 MARCH2Q9P0N8 246 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 DFFAO00273 331 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 C2CD2LO14523 706 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 MAFKO60675 156 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 JCHAINP01591 159 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 CSF2RAP15509 400 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 RFC2P35250 354 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 C10orf120Q5SQS8 335 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 CDHR3Q6ZTQ4 885 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 SLC39A11Q8N1S5 342 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 PTPRN2Q92932 1015 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 OXNAD1Q96HP4 312 aaPredicted RBP14.34□□□□□ -0.11
ABCF3-201ENST00000292808 SRPK1Q96SB4 655 aaKnown RBP14.34□□□□□ -0.11
ABCF3-201ENST00000292808 SLC13A1Q9BZW2 595 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 IQCGQ9H095 443 aaKnown RBP14.34□□□□□ -0.11
ABCF3-201ENST00000292808 CATSPERBQ9H7T0 1116 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 MANSC1Q9H8J5 431 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 VANGL2Q9ULK5 521 aa14.34□□□□□ -0.11
ABCF3-201ENST00000292808 KIAA0100Q14667 2235 aaKnown RBP14.33□□□□□ -0.12
ABCF3-201ENST00000292808 WASH4PA8MWX3 477 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 MTSS1O43312 755 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 USP12O75317 370 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 ZNF189O75820 626 aaPredicted RBP14.33□□□□□ -0.12
ABCF3-201ENST00000292808 AP2A1O95782 977 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 PSEN1P49768 467 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 ZNF33AQ06730 810 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 OVGP1Q12889 678 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 PREPLQ4J6C6 727 aaPredicted RBP14.33□□□□□ -0.12
ABCF3-201ENST00000292808 FYB2Q5VWT5 728 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 CES3Q6UWW8 571 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 KLHDC8BQ8IXV7 354 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 MYEOVQ96EZ4 313 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 C11orf49Q9H6J7 331 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 SYBUQ9NX95 663 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 MOCS1Q9NZB8 636 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 BAIAP2L1Q9UHR4 511 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 TRHDEQ9UKU6 1024 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 ABHD14A-ACY1A0A1B0GW23 586 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 CACNG3O60359 315 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 KRT38O76015 456 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 CNTN5O94779 1100 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 IL1BP01584 269 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 SOD2P04179 222 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 KRT16P08779 473 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 SLC2A3P11169 496 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 CCNCP24863 283 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 ALFQ53S48 1182 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 FBXO46Q6PJ61 603 aaPredicted RBP14.33□□□□□ -0.12
ABCF3-201ENST00000292808 OR52K1Q8NGK4 314 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 USP33Q8TEY7 942 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 IGSF8Q969P0 613 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 ERP27Q96DN0 273 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 VAT1Q99536 393 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 NPHS2Q9NP85 383 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 OLA1Q9NTK5 396 aaKnown RBP14.33□□□□□ -0.12
ABCF3-201ENST00000292808 ZNF212Q9UDV6 495 aa14.33□□□□□ -0.12
ABCF3-201ENST00000292808 MAGED2Q9UNF1 606 aaPredicted RBP14.33□□□□□ -0.12
ABCF3-201ENST00000292808 IGLV3-10A0A075B6K4 115 aa14.32□□□□□ -0.12
ABCF3-201ENST00000292808 SLC12A8A0AV02 714 aa14.32□□□□□ -0.12
ABCF3-201ENST00000292808 RFPL1O75677 317 aa14.32□□□□□ -0.12
ABCF3-201ENST00000292808 ABLIM3O94929 683 aa14.32□□□□□ -0.12
ABCF3-201ENST00000292808 HMBSP08397 361 aa14.32□□□□□ -0.12
ABCF3-201ENST00000292808 TROVE2P10155 538 aaKnown RBP eCLIP14.32□□□□□ -0.12
ABCF3-201ENST00000292808 WDR5P61964 334 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms