RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 OMDQ99983 421 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 FUCA2Q9BTY2 467 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 SPON2Q9BUD6 331 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 NUP58Q9BVL2 599 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 MAGEB5Q9BZ81 275 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 IRX2Q9BZI1 471 aaPredicted RBP10.04□□□□□ -0.8
CCDC58-201ENST00000291458 FBXL12Q9NXK8 326 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 DAAM1Q9Y4D1 1078 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 PAXBP1Q9Y5B6 917 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 ASCC3Q8N3C0 2202 aaKnown RBP10.04□□□□□ -0.8
CCDC58-201ENST00000291458 DMXL1Q9Y485 3027 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 A0A0D9SEW6 157 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 C2CD4BA6NLJ0 364 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 K7ERQ8 282 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 CBX4O00257 560 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 CDX4O14627 284 aaPredicted RBP10.03□□□□□ -0.8
CCDC58-201ENST00000291458 CCP110O43303 1012 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 CLDN11O75508 207 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 F9P00740 461 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 SRPRAP08240 638 aaKnown RBP10.03□□□□□ -0.8
CCDC58-201ENST00000291458 SERPINF2P08697 491 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 KRT3P12035 628 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 UNGP13051 313 aaPredicted RBP10.03□□□□□ -0.8
CCDC58-201ENST00000291458 GNSP15586 552 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 TNFAIP3P21580 790 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 OXTRP30559 389 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 OR1E1P30953 314 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 LIMK1P53667 647 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 CDH4P55283 916 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 TPM4P67936 248 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 PTP4A2Q12974 167 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 GRIK2Q13002 908 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 IQCB1Q15051 598 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 CCDC14Q49A88 953 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 TDRD12Q587J7 1177 aaKnown RBP10.03□□□□□ -0.8
CCDC58-201ENST00000291458 SPDYCQ5MJ68 293 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 SFMBT2Q5VUG0 894 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 SCYL2Q6P3W7 929 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 LEKR1Q6ZMV7 388 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 ZNF354CQ86Y25 554 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 HDDC3Q8N4P3 179 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 MINDY1Q8N5J2 469 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 ATP11CQ8NB49 1132 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 GRIN3AQ8TCU5 1115 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 BAP1Q92560 729 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 PSMB7Q99436 277 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 FEM1AQ9BSK4 669 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 BTBD1Q9H0C5 482 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 RSPH9Q9H1X1 276 aaPredicted RBP10.03□□□□□ -0.8
CCDC58-201ENST00000291458 TNKS2Q9H2K2 1166 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 FBRSQ9HAH7 460 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 SUSD2Q9UGT4 822 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 EVLQ9UI08 416 aaPredicted RBP10.03□□□□□ -0.8
CCDC58-201ENST00000291458 VPS51Q9UID3 782 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 SLC6A14Q9UN76 642 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 NCKAP1Q9Y2A7 1128 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 FCF1Q9Y324 198 aaKnown RBP10.03□□□□□ -0.8
CCDC58-201ENST00000291458 ACTL7AQ9Y615 435 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 ITIH6Q6UXX5 1313 aa10.03□□□□□ -0.8
CCDC58-201ENST00000291458 A0A1B0GTH6 734 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 A0A1B0GVT2 93 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 ANKRD62A6NC57 917 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 FAM72CH0Y354 149 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 GOLGA6L19H0YKK7 550 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 OPHN1O60890 802 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 KCNK5O95279 499 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 MT-CO1P00395 513 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 SKILP12757 684 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 SLC8A1P32418 973 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 RFC1P35251 1148 aaPredicted RBP10.02□□□□□ -0.81
CCDC58-201ENST00000291458 DPP6P42658 865 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 RPL7AP62424 266 aaKnown RBP10.02□□□□□ -0.81
CCDC58-201ENST00000291458 FANCCQ00597 558 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 SULT2A1Q06520 285 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 ZNF252P-AS1Q0IIN9 211 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 ZSCAN23Q3MJ62 389 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 ARL13BQ3SXY8 428 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 FAM72AQ5TYM5 149 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 PEAR1Q5VY43 1037 aaPredicted RBP10.02□□□□□ -0.81
CCDC58-201ENST00000291458 FAM72DQ6L9T8 149 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 DCUN1D2Q6PH85 259 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 SLC23A3Q6PIS1 610 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 NCEH1Q6PIU2 408 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 WDR59Q6PJI9 974 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 FAM72BQ86X60 149 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 PHF13Q86YI8 300 aaPredicted RBP10.02□□□□□ -0.81
CCDC58-201ENST00000291458 ZNF683Q8IZ20 524 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 PYROXD2Q8N2H3 581 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 AADATQ8N5Z0 425 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 C3orf20Q8ND61 904 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 OR14C36Q8NHC7 312 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 CEP76Q8TAP6 659 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 OR8D1Q8WZ84 308 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 PTPRN2Q92932 1015 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 NT5C3BQ969T7 300 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 PGAP3Q96FM1 320 aaPredicted RBP10.02□□□□□ -0.81
CCDC58-201ENST00000291458 ZNF419Q96HQ0 510 aaPredicted RBP10.02□□□□□ -0.81
CCDC58-201ENST00000291458 NEUROG2Q9H2A3 272 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 HAUS4Q9H6D7 363 aa10.02□□□□□ -0.81
CCDC58-201ENST00000291458 CAPN10Q9HC96 672 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms