RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 KLHDC10Q6PID8 442 aa10.39□□□□□ -0.75
C9orf43-201ENST00000288462 OTOP3Q7RTS5 596 aa10.39□□□□□ -0.75
C9orf43-201ENST00000288462 YTHDF3Q7Z739 585 aaKnown RBP10.39□□□□□ -0.75
C9orf43-201ENST00000288462 TMEM135Q86UB9 458 aa10.39□□□□□ -0.75
C9orf43-201ENST00000288462 UNC5BQ8IZJ1 945 aa10.39□□□□□ -0.75
C9orf43-201ENST00000288462 ZNF461Q8TAF7 563 aa10.39□□□□□ -0.75
C9orf43-201ENST00000288462 USP33Q8TEY7 942 aa10.39□□□□□ -0.75
C9orf43-201ENST00000288462 IGSF8Q969P0 613 aa10.39□□□□□ -0.75
C9orf43-201ENST00000288462 TMEM169Q96HH4 297 aa10.39□□□□□ -0.75
C9orf43-201ENST00000288462 MYRFLQ96LU7 910 aa10.39□□□□□ -0.75
C9orf43-201ENST00000288462 FGFR1OP2Q9NVK5 253 aa10.39□□□□□ -0.75
C9orf43-201ENST00000288462 SAMD15Q9P1V8 674 aa10.39□□□□□ -0.75
C9orf43-201ENST00000288462 IPO11Q9UI26 975 aaKnown RBP10.39□□□□□ -0.75
C9orf43-201ENST00000288462 AAR2Q9Y312 384 aaKnown RBP10.39□□□□□ -0.75
C9orf43-201ENST00000288462 RRP15Q9Y3B9 282 aaKnown RBP10.39□□□□□ -0.75
C9orf43-201ENST00000288462 YIPF1Q9Y548 306 aa10.39□□□□□ -0.75
C9orf43-201ENST00000288462 MRPL42Q9Y6G3 142 aaKnown RBP10.39□□□□□ -0.75
C9orf43-201ENST00000288462 MIA3Q5JRA6 1907 aa10.38□□□□□ -0.75
C9orf43-201ENST00000288462 HMX2A2RU54 273 aa10.38□□□□□ -0.75
C9orf43-201ENST00000288462 TRIM43BA6NCK2 446 aa10.38□□□□□ -0.75
C9orf43-201ENST00000288462 GOLGA8RI6L899 631 aa10.38□□□□□ -0.75
C9orf43-201ENST00000288462 KRT38O76015 456 aa10.38□□□□□ -0.75
C9orf43-201ENST00000288462 ANXA9O76027 345 aa10.38□□□□□ -0.75
C9orf43-201ENST00000288462 USP1O94782 785 aa10.38□□□□□ -0.75
C9orf43-201ENST00000288462 DHRS4L1P0CG22 281 aa10.38□□□□□ -0.75
C9orf43-201ENST00000288462 TNK2Q07912 1038 aa10.38□□□□□ -0.75
C9orf43-201ENST00000288462 ITIH4Q14624 930 aa10.38□□□□□ -0.75
C9orf43-201ENST00000288462 LVRNQ6Q4G3 990 aa10.38□□□□□ -0.75
C9orf43-201ENST00000288462 TFAP2DQ7Z6R9 452 aa10.38□□□□□ -0.75
C9orf43-201ENST00000288462 TMCO2Q7Z6W1 182 aaPredicted RBP10.38□□□□□ -0.75
C9orf43-201ENST00000288462 LINC00523Q86TU6 105 aa10.38□□□□□ -0.75
C9orf43-201ENST00000288462 CNPY4Q8N129 248 aa10.38□□□□□ -0.75
C9orf43-201ENST00000288462 CCDC197Q8NCU1 140 aa10.38□□□□□ -0.75
C9orf43-201ENST00000288462 TCP10LQ8TDR4 215 aa10.38□□□□□ -0.75
C9orf43-201ENST00000288462 CDKL2Q92772 493 aa10.38□□□□□ -0.75
C9orf43-201ENST00000288462 TRIM43Q96BQ3 446 aaPredicted RBP10.38□□□□□ -0.75
C9orf43-201ENST00000288462 HMCESQ96FZ2 354 aa10.38□□□□□ -0.75
C9orf43-201ENST00000288462 CERS2Q96G23 380 aa10.38□□□□□ -0.75
C9orf43-201ENST00000288462 TRMT2BQ96GJ1 504 aaKnown RBP10.38□□□□□ -0.75
C9orf43-201ENST00000288462 PAWRQ96IZ0 340 aaKnown RBP10.38□□□□□ -0.75
C9orf43-201ENST00000288462 KLF6Q99612 283 aaPredicted RBP10.38□□□□□ -0.75
C9orf43-201ENST00000288462 BFARQ9NZS9 450 aa10.38□□□□□ -0.75
C9orf43-201ENST00000288462 DNMT3LQ9UJW3 386 aa10.38□□□□□ -0.75
C9orf43-201ENST00000288462 MAGED2Q9UNF1 606 aaPredicted RBP10.38□□□□□ -0.75
C9orf43-201ENST00000288462 ZCWPW2A0A1B0GU75 182 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 FAM237BA0A1B0GVD1 139 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 ZNF840PA6NDX5 716 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 C2CD2LO14523 706 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 SNX3O60493 162 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 LPXNO60711 386 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 RFPL1O75677 317 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 HMBSP08397 361 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 PYGBP11216 843 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 CSF2RAP15509 400 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 ADRA1DP25100 572 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 ADRA1AP35348 466 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 ETV4P43268 484 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 MAPKAPK2P49137 400 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 GEMP55040 296 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 MGAT5Q09328 741 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 CDH17Q12864 832 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 RAB33AQ14088 237 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 SPOUT1Q5T280 376 aaKnown RBP10.37□□□□□ -0.75
C9orf43-201ENST00000288462 HHATQ5VTY9 493 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 TIFABQ6ZNK6 161 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 DDX53Q86TM3 631 aaKnown RBP10.37□□□□□ -0.75
C9orf43-201ENST00000288462 CHSY1Q86X52 802 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 FCRL3Q96P31 734 aaPredicted RBP10.37□□□□□ -0.75
C9orf43-201ENST00000288462 TBL1YQ9BQ87 522 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 IL22Q9GZX6 179 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 SPG21Q9NZD8 308 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 SOX13Q9UN79 622 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 RPS6KL1Q9Y6S9 549 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 BAIAP3O94812 1187 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 TACR2P21452 398 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 ATP5C1P36542 298 aaKnown RBP10.37□□□□□ -0.75
C9orf43-201ENST00000288462 KCNQ1P51787 676 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 DNAJC3Q13217 504 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 BMPR2Q13873 1038 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 HNRNPDQ14103 355 aaKnown RBP10.37□□□□□ -0.75
C9orf43-201ENST00000288462 BTG3Q14201 252 aaPredicted RBP10.37□□□□□ -0.75
C9orf43-201ENST00000288462 ZKSCAN8Q15776 578 aaPredicted RBP10.37□□□□□ -0.75
C9orf43-201ENST00000288462 PARP15Q460N3 678 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 CERCAMQ5T4B2 595 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 CGB2Q6NT52 195 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 PACS1Q6VY07 963 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 RASSF3Q86WH2 238 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 CCDC117Q8IWD4 279 aaPredicted RBP10.37□□□□□ -0.75
C9orf43-201ENST00000288462 DNAAF3Q8N9W5 541 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.37□□□□□ -0.75
C9orf43-201ENST00000288462 SPATA22Q8NHS9 363 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 ZNF669Q96BR6 464 aaPredicted RBP10.37□□□□□ -0.75
C9orf43-201ENST00000288462 MYEOVQ96EZ4 313 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 CABS1Q96KC9 395 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 ZNF512Q96ME7 567 aaPredicted RBP10.37□□□□□ -0.75
C9orf43-201ENST00000288462 RPRD1AQ96P16 312 aaPredicted RBP10.37□□□□□ -0.75
C9orf43-201ENST00000288462 PAIP2Q9BPZ3 127 aaKnown RBP10.37□□□□□ -0.75
C9orf43-201ENST00000288462 ELAC2Q9BQ52 826 aaKnown RBP10.37□□□□□ -0.75
C9orf43-201ENST00000288462 APOL2Q9BQE5 337 aa10.37□□□□□ -0.75
C9orf43-201ENST00000288462 RETREG1Q9H6L5 497 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms