RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 AIF1P55008 147 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 ADGRE1Q14246 886 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 TICAM1Q8IUC6 712 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 COLGALT1Q8NBJ5 622 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 HSPBAP1Q96EW2 488 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 BIRC8Q96P09 236 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 RBBP8Q99708 897 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 DHX35Q9H5Z1 703 aaKnown RBP10.58□□□□□ -0.72
SKA1-201ENST00000285116 STK39Q9UEW8 545 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 BCAP29Q9UHQ4 241 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 PCDHGB4Q9UN71 923 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 PCDHGB5Q9Y5G0 923 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 SBF1O95248 1867 aa10.58□□□□□ -0.72
SKA1-201ENST00000285116 ERI2A8K979 691 aaKnown RBP10.57□□□□□ -0.72
SKA1-201ENST00000285116 TSPAN1O60635 241 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 SUPT3HO75486 399 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 GJB1P08034 283 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 COX4I1P13073 169 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 ARRB2P32121 409 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 CSE1LP55060 971 aaKnown RBP10.57□□□□□ -0.72
SKA1-201ENST00000285116 TMEM62Q0P6H9 643 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 PDK1Q15118 436 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 PPP6R3Q5H9R7 873 aaPredicted RBP10.57□□□□□ -0.72
SKA1-201ENST00000285116 DHRS4L2Q6PKH6 230 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 ATG14Q6ZNE5 492 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 Q6ZNX1 250 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 FRMD7Q6ZUT3 714 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 SETD3Q86TU7 594 aaPredicted RBP10.57□□□□□ -0.72
SKA1-201ENST00000285116 TMEM135Q86UB9 458 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 KLHDC8BQ8IXV7 354 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 CERS2Q96G23 380 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 TRIM56Q9BRZ2 755 aaKnown RBP10.57□□□□□ -0.72
SKA1-201ENST00000285116 SHCBP1LQ9BZQ2 653 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 DNAI2Q9GZS0 605 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 ZNF385DQ9H6B1 395 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 ZNHIT2Q9UHR6 403 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 GNEQ9Y223 722 aaKnown RBP10.57□□□□□ -0.72
SKA1-201ENST00000285116 NME7Q9Y5B8 376 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 SH3PXD2BA1X283 911 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 KPNA7A9QM74 516 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 ARL4AP40617 200 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 RGS7P49802 495 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 CDK9P50750 372 aaKnown RBP10.57□□□□□ -0.72
SKA1-201ENST00000285116 C16orf46Q6P387 395 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 ISLR2Q6UXK2 745 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 SCUBE3Q8IX30 993 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 C12orf29Q8N999 325 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 TRAPPC12Q8WVT3 735 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 SREK1Q8WXA9 508 aaKnown RBP10.57□□□□□ -0.72
SKA1-201ENST00000285116 EMID1Q96A84 441 aaPredicted RBP10.57□□□□□ -0.72
SKA1-201ENST00000285116 SERPINI1Q99574 410 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 MRPL45Q9BRJ2 306 aaKnown RBP10.57□□□□□ -0.72
SKA1-201ENST00000285116 BRD8Q9H0E9 1235 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 PLGRKTQ9HBL7 147 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 PNPOQ9NVS9 261 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 ARHGEF38Q9NXL2 777 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.57□□□□□ -0.72
SKA1-201ENST00000285116 TMEM216Q9P0N5 145 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 ANKRD6Q9Y2G4 727 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 DICER1Q9UPY3 1922 aaKnown RBP10.57□□□□□ -0.72
SKA1-201ENST00000285116 MCM3APO60318 1980 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 ZNF638Q14966 1978 aaKnown RBP10.57□□□□□ -0.72
SKA1-201ENST00000285116 LOC100653049A0A140TA62 436 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 G3V2L1 256 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 RNF103O00237 685 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 DAB1O75553 588 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 KRT34O76011 436 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 CELF2O95319 508 aaKnown RBP10.57□□□□□ -0.72
SKA1-201ENST00000285116 TOP3BO95985 862 aaKnown RBP10.57□□□□□ -0.72
SKA1-201ENST00000285116 MGAT1P26572 445 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 VARSP26640 1264 aaKnown RBP10.57□□□□□ -0.72
SKA1-201ENST00000285116 SPRP35270 261 aaPredicted RBP10.57□□□□□ -0.72
SKA1-201ENST00000285116 MATKP42679 507 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 KLF10Q13118 480 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 RFTN1Q14699 578 aaPredicted RBP10.57□□□□□ -0.72
SKA1-201ENST00000285116 SLC25A52Q3SY17 297 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 CDR2LQ86X02 465 aaPredicted RBP10.57□□□□□ -0.72
SKA1-201ENST00000285116 EFCAB3Q8N7B9 438 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 TRPC4APQ8TEL6 797 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 LRRC40Q9H9A6 602 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 SNX15Q9NRS6 342 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 TUBGCP4Q9UGJ1 667 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 RIMS3Q9UJD0 308 aa10.57□□□□□ -0.72
SKA1-201ENST00000285116 A0A087WZ62 844 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 MAGEB16A2A368 324 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 USP2O75604 605 aaPredicted RBP10.56□□□□□ -0.72
SKA1-201ENST00000285116 THRAP10827 490 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 CYP2C9P11712 490 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 PORP16435 677 aaPredicted RBP10.56□□□□□ -0.72
SKA1-201ENST00000285116 ZNF23P17027 643 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 TFE3P19532 575 aaPredicted RBP10.56□□□□□ -0.72
SKA1-201ENST00000285116 NCF2P19878 526 aaPredicted RBP10.56□□□□□ -0.72
SKA1-201ENST00000285116 YY1P25490 414 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 DNAJB2P25686 324 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 ACADVLP49748 655 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 RAB15P59190 212 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 DPYSQ14117 519 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 PCBP1Q15365 356 aaKnown RBP eCLIP10.56□□□□□ -0.72
SKA1-201ENST00000285116 INTS6LQ5JSJ4 861 aaKnown RBP10.56□□□□□ -0.72
SKA1-201ENST00000285116 POTEHQ6S545 545 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms