RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 HSD3B2P26439 372 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 GSTT1P30711 240 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 ZNF248Q8NDW4 579 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 NKX2-3Q8TAU0 364 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 FBXO44Q9H4M3 255 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 GJB4Q9NTQ9 266 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 OGTO15294 1046 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 IGSF6O95976 241 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 SDC2P34741 201 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 CRATP43155 626 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 LHX1P48742 406 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 ARF3P61204 181 aaPredicted RBP8.86□□□□□ -0.99
NIPBL-201ENST00000282516 ARF1P84077 181 aaKnown RBP8.86□□□□□ -0.99
NIPBL-201ENST00000282516 SLC15A2Q16348 729 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 RFX4Q33E94 735 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 ATP13A5Q4VNC0 1218 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 MILR1Q7Z6M3 343 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 EMC1Q8N766 993 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 CHST13Q8NET6 341 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 KLHL32Q96NJ5 620 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 CBWD1Q9BRT8 395 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 GMPPBQ9Y5P6 360 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 FAAH2Q6GMR7 532 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 SYT12Q8IV01 421 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 TBCBQ99426 244 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 CNPPD1Q9BV87 410 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 RMI1Q9H9A7 625 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 PCDHB12Q9Y5F1 795 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 GPC6Q9Y625 555 aaPredicted RBP8.85□□□□□ -0.99
NIPBL-201ENST00000282516 G3V2T6 193 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 RBAK-RBAKDNI3L0D1 243 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 YY1P25490 414 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 NAA30Q147X3 362 aaPredicted RBP8.85□□□□□ -0.99
NIPBL-201ENST00000282516 SETMARQ53H47 684 aaPredicted RBP8.85□□□□□ -0.99
NIPBL-201ENST00000282516 SLC4A11Q8NBS3 891 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 LPCAT1Q8NF37 534 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 LENG1Q96BZ8 264 aaPredicted RBP8.85□□□□□ -0.99
NIPBL-201ENST00000282516 SPACA7Q96KW9 195 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 PSMD11O00231 422 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 RB1P06400 928 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 PLEKP08567 350 aaPredicted RBP8.85□□□□□ -0.99
NIPBL-201ENST00000282516 NR1H2P55055 460 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 ACTR3P61158 418 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 ELAVL2Q12926 359 aaKnown RBP8.85□□□□□ -0.99
NIPBL-201ENST00000282516 NFE2Q16621 373 aaPredicted RBP8.85□□□□□ -0.99
NIPBL-201ENST00000282516 CTXN3Q4LDR2 81 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 CYP2R1Q6VVX0 501 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 SNX32Q86XE0 403 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.85□□□□□ -0.99
NIPBL-201ENST00000282516 VPS35Q96QK1 796 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 ERGIC2Q96RQ1 377 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 RIT2Q99578 217 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 SEMA6AQ9H2E6 1030 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 CDC42EP4Q9H3Q1 356 aaKnown RBP8.85□□□□□ -0.99
NIPBL-201ENST00000282516 PLGRKTQ9HBL7 147 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 SAR1AQ9NR31 198 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 TBC1D24Q9ULP9 559 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 VPS4AQ9UN37 437 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 METTL21EPA6NDL7 271 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 FAM196BA6NMK8 535 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 VDRP11473 427 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 NFKB1P19838 968 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 FGFR3P22607 806 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 POLR2LP62875 67 aaKnown RBP8.85□□□□□ -0.99
NIPBL-201ENST00000282516 SREBF2Q12772 1141 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 SFRP1Q8N474 314 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 RERGQ96A58 199 aaPredicted RBP8.85□□□□□ -0.99
NIPBL-201ENST00000282516 CST11Q9H112 138 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 ELP3Q9H9T3 547 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 TRMT13Q9NUP7 481 aaKnown RBP8.85□□□□□ -0.99
NIPBL-201ENST00000282516 DDX20Q9UHI6 824 aaKnown RBP8.85□□□□□ -0.99
NIPBL-201ENST00000282516 FBXO10Q9UK96 956 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 H3BNH8 94 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 OR10H2O60403 315 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 RTN3O95197 1032 aaPredicted RBP8.85□□□□□ -0.99
NIPBL-201ENST00000282516 USP41Q3LFD5 358 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 GLT6D1Q7Z4J2 308 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 ADGRG2Q8IZP9 1017 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 ACTRT1Q8TDG2 376 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 C12orf4Q9NQ89 552 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 SSR3Q9UNL2 185 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 EFR3BQ9Y2G0 817 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 GPR182O15218 404 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 MAGEC1O60732 1142 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 CYP2F1P24903 491 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 POU6F1Q14863 301 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 C1orf189Q5VU69 101 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 DSELQ8IZU8 1212 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 COG5Q9UP83 839 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 CYB561D2O14569 222 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 ATF6P18850 670 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 WDR93Q6P2C0 686 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 CLHC1Q8NHS4 586 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 KCNK4Q9NYG8 393 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 RNF181Q9P0P0 153 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 GNPTGQ9UJJ9 305 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 C3orf18Q9UK00 162 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 SYNPO2Q9UMS6 1093 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 USP6P35125 1406 aa8.85□□□□□ -0.99
NIPBL-201ENST00000282516 MYMKA6NI61 221 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms