RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 RNF11Q9Y3C5 154 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 BPTFQ12830 3046 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 C7orf72A4D263 438 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.58□□□□□ -0.56
SCLT1-201ENST00000281142 RNASEH2AO75792 299 aaKnown RBP11.58□□□□□ -0.56
SCLT1-201ENST00000281142 FARP2O94887 1054 aaPredicted RBP11.58□□□□□ -0.56
SCLT1-201ENST00000281142 CSPG5O95196 566 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 HSPA4LO95757 839 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 GJB1P08034 283 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 CPA3P15088 417 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 SMPD1P17405 629 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 TYK2P29597 1187 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 MAGEA6P43360 314 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 OXCT1P55809 520 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 GSTM4Q03013 218 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 PTPN11Q06124 597 aaPredicted RBP11.58□□□□□ -0.56
SCLT1-201ENST00000281142 CACNB2Q08289 660 aaPredicted RBP11.58□□□□□ -0.56
SCLT1-201ENST00000281142 TTLL4Q14679 1199 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 NUP93Q8N1F7 819 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 MCUQ8NE86 351 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 SLC7A3Q8WY07 619 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 ZFRQ96KR1 1074 aaKnown RBP11.58□□□□□ -0.56
SCLT1-201ENST00000281142 CNPY3Q9BT09 278 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 CDH19Q9H159 772 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 SIX4Q9UIU6 781 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 MAGED2Q9UNF1 606 aaPredicted RBP11.58□□□□□ -0.56
SCLT1-201ENST00000281142 CROCCQ5TZA2 2017 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 SIP14410 1827 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 BCLAF3A2AJT9 711 aaKnown RBP11.57□□□□□ -0.56
SCLT1-201ENST00000281142 TMX2-CTNND1H3BSU7 103 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 MSCO60682 206 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 JUNP05412 331 aaKnown RBP11.57□□□□□ -0.56
SCLT1-201ENST00000281142 CYBAP13498 195 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 CDH15P55291 814 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 RPL26P61254 145 aaKnown RBP11.57□□□□□ -0.56
SCLT1-201ENST00000281142 ARHGEF6Q15052 776 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 FAM219BQ5XKK7 198 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 SPNS2Q8IVW8 549 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 FNDC8Q8TC99 324 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 LRRC39Q96DD0 335 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 Q9H521 79 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 PFDN4Q9NQP4 134 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 ZNF302Q9NR11 478 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 TRIM43BA6NCK2 446 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 B4GALT5O43286 388 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 P4HA1P13674 534 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 ARSAP15289 507 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 GJA8P48165 433 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 SERPINB8P50452 374 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 MFSD14CQ5VZR4 134 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 KCNT2Q6UVM3 1135 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 C12orf29Q8N999 325 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 ACVR1CQ8NER5 493 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 PXYLP1Q8TE99 480 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 APBB2Q92870 758 aa11.57□□□□□ -0.56
SCLT1-201ENST00000281142 DHX35Q9H5Z1 703 aaKnown RBP11.57□□□□□ -0.56
SCLT1-201ENST00000281142 CPSF3Q9UKF6 684 aaKnown RBP11.57□□□□□ -0.56
SCLT1-201ENST00000281142 PLOD2O00469 737 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 MED7O43513 233 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 DKC1O60832 514 aaKnown RBP eCLIP11.56□□□□□ -0.56
SCLT1-201ENST00000281142 E2F6O75461 281 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 NFICP08651 508 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 CXCL8P10145 99 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 GLDCP23378 1020 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 CYP2F1P24903 491 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 ITGA7Q13683 1181 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 HSDL1Q3SXM5 330 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 PIGGQ5H8A4 983 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 CELF3Q5SZQ8 465 aaKnown RBP11.56□□□□□ -0.56
SCLT1-201ENST00000281142 EEF1DP3Q658K8 133 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 SLC9A4Q6AI14 798 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 BNC2Q6ZN30 1099 aaPredicted RBP11.56□□□□□ -0.56
SCLT1-201ENST00000281142 SLC15A3Q8IY34 581 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 LRRC71Q8N4P6 559 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 TDRD5Q8NAT2 981 aaKnown RBP11.56□□□□□ -0.56
SCLT1-201ENST00000281142 ARNTL2Q8WYA1 636 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 HEXIM2Q96MH2 286 aaKnown RBP11.56□□□□□ -0.56
SCLT1-201ENST00000281142 SLC4A5Q9BY07 1137 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 FRMD8Q9BZ67 464 aaPredicted RBP11.56□□□□□ -0.56
SCLT1-201ENST00000281142 TCF7L2Q9NQB0 619 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 SNX15Q9NRS6 342 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 SYBUQ9NX95 663 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 PCDHB12Q9Y5F1 795 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 TFPTP0C1Z6 253 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 THRAP10827 490 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 PRKAR2AP13861 404 aaKnown RBP11.56□□□□□ -0.56
SCLT1-201ENST00000281142 GRK2P25098 689 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 CCND3P30281 292 aaPredicted RBP11.56□□□□□ -0.56
SCLT1-201ENST00000281142 PRMT2P55345 433 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 TNFAIP2Q03169 654 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 ARHGAP1Q07960 439 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 LPIN1Q14693 890 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 LSM12Q3MHD2 195 aaKnown RBP11.56□□□□□ -0.56
SCLT1-201ENST00000281142 ANKDD1AQ495B1 522 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 DUSP28Q4G0W2 176 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 DCLK2Q8N568 766 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 KYQ8NBH2 561 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 ATP6V1E2Q96A05 226 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 LGMNQ99538 433 aa11.56□□□□□ -0.56
SCLT1-201ENST00000281142 NPAS2Q99743 824 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms