RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 ARIH1Q9Y4X5 557 aaPredicted RBP6.69□□□□□ -1.34
CD44-204ENST00000279452 EPN1Q9Y6I3 576 aaPredicted RBP6.69□□□□□ -1.34
CD44-204ENST00000279452 MUC3AQ02505 3323 aa6.69□□□□□ -1.34
CD44-204ENST00000279452 CCDC163A0A0D9SF12 145 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 MACROD2A1Z1Q3 448 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 LRRD1A4D1F6 860 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 RASA4BC9J798 803 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 K7ERQ8 282 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 RASA4O43374 803 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 HRO43593 1189 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 GFRA3O60609 400 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 ZNF217O75362 1048 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 RHOBTB1O94844 696 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 IL1BP01584 269 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 KRT7P08729 469 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 CHRM1P11229 460 aaPredicted RBP6.68□□□□□ -1.34
CD44-204ENST00000279452 SRCP12931 536 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 VAV1P15498 845 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 ERCC2P18074 760 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 HOXA6P31267 233 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 MAN1A1P33908 653 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 HTR7P34969 479 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 ARHGAP25P42331 645 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 DHPSP49366 369 aaPredicted RBP6.68□□□□□ -1.34
CD44-204ENST00000279452 SERPINH1P50454 418 aaKnown RBP6.68□□□□□ -1.34
CD44-204ENST00000279452 PLK1P53350 603 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 COPAP53621 1224 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 GEMIN4P57678 1058 aaKnown RBP6.68□□□□□ -1.34
CD44-204ENST00000279452 TAS2R40P59535 323 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 RPL6Q02878 288 aaKnown RBP6.68□□□□□ -1.34
CD44-204ENST00000279452 SLC25A11Q02978 314 aaKnown RBP6.68□□□□□ -1.34
CD44-204ENST00000279452 DLG2Q15700 870 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 DPYSL2Q16555 572 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 HNRNPA1L2Q32P51 320 aaKnown RBP6.68□□□□□ -1.34
CD44-204ENST00000279452 PARP15Q460N3 678 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 BOLA3Q53S33 107 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 C22orf39Q6P5X5 142 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 TMCO3Q6UWJ1 677 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 ZNF783Q6ZMS7 281 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 DSG4Q86SJ6 1040 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 KBTBD6Q86V97 674 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 NLRP14Q86W24 1093 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 RASSF3Q86WH2 238 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 PSTKQ8IV42 348 aaKnown RBP6.68□□□□□ -1.34
CD44-204ENST00000279452 CCDC50Q8IVM0 306 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 MAP7D3Q8IWC1 876 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 STK40Q8N2I9 435 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 SH2D3CQ8N5H7 860 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 NETO2Q8NC67 525 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 GRIN3AQ8TCU5 1115 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 TEKT4Q8WW24 435 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 OR8D1Q8WZ84 308 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 SNX19Q92543 992 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 HMCESQ96FZ2 354 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 MRGPRX3Q96LB0 322 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 PSMB7Q99436 277 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 OMDQ99983 421 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 TM6SF2Q9BZW4 377 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 MKRN2Q9H000 416 aaKnown RBP6.68□□□□□ -1.34
CD44-204ENST00000279452 MAGEH1Q9H213 219 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 TMEM245Q9H330 911 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 GOLPH3Q9H4A6 298 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 FBRSQ9HAH7 460 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 CD93Q9NPY3 652 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 PRSS16Q9NQE7 514 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 CWC15Q9P013 229 aaKnown RBP6.68□□□□□ -1.34
CD44-204ENST00000279452 NEU3Q9UQ49 428 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 NCKAP1Q9Y2A7 1128 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 FCF1Q9Y324 198 aaKnown RBP6.68□□□□□ -1.34
CD44-204ENST00000279452 ACTL7AQ9Y615 435 aa6.68□□□□□ -1.34
CD44-204ENST00000279452 ATXN2Q99700 1313 aaKnown RBP6.68□□□□□ -1.34
CD44-204ENST00000279452 BDP1A6H8Y1 2624 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 TARSL2A2RTX5 802 aaKnown RBP6.67□□□□□ -1.34
CD44-204ENST00000279452 PRR23AA6NEV1 266 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 FAM47DPA6NHR8 397 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 ARHGAP42A6NI28 874 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 MEI4A8MW99 385 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 C1QTNF3-AMACRE9PGA6 284 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 KPNA3O00505 521 aaPredicted RBP6.67□□□□□ -1.34
CD44-204ENST00000279452 BUB1BO60566 1050 aaPredicted RBP6.67□□□□□ -1.34
CD44-204ENST00000279452 LILRB5O75023 590 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 RNASEH2AO75792 299 aaKnown RBP6.67□□□□□ -1.34
CD44-204ENST00000279452 NEBLO76041 1014 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 LCA5LO95447 670 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 MT-CO1P00395 513 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 CD48P09326 243 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 BCKDHBP21953 392 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 COMTP21964 271 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 AMPD1P23109 780 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 CD6P30203 668 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 SERPINB6P35237 376 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 MRE11P49959 708 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 TPMTP51580 245 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 CLCN6P51797 869 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 VAV2P52735 878 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 ZNF135P52742 658 aaPredicted RBP6.67□□□□□ -1.34
CD44-204ENST00000279452 YBEYP58557 167 aaPredicted RBP6.67□□□□□ -1.34
CD44-204ENST00000279452 RHOAP61586 193 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 RPS14P62263 151 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms