RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 VNN2O95498 520 aa18.29■□□□□ 0.52
CAPN1-201ENST00000279247 C1QTNF8P60827 252 aa18.29■□□□□ 0.52
CAPN1-201ENST00000279247 COG7P83436 770 aa18.29■□□□□ 0.52
CAPN1-201ENST00000279247 EIF4EBP2Q13542 120 aaPredicted RBP18.29■□□□□ 0.52
CAPN1-201ENST00000279247 RFWD3Q6PCD5 774 aa18.29■□□□□ 0.52
CAPN1-201ENST00000279247 STRA8Q7Z7C7 330 aa18.29■□□□□ 0.52
CAPN1-201ENST00000279247 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.29■□□□□ 0.52
CAPN1-201ENST00000279247 ZSCAN18Q8TBC5 510 aaPredicted RBP18.29■□□□□ 0.52
CAPN1-201ENST00000279247 ATP2A3Q93084 1043 aa18.29■□□□□ 0.52
CAPN1-201ENST00000279247 IGSF8Q969P0 613 aa18.29■□□□□ 0.52
CAPN1-201ENST00000279247 ZNF512Q96ME7 567 aaPredicted RBP18.29■□□□□ 0.52
CAPN1-201ENST00000279247 FSD1LQ9BXM9 530 aa18.29■□□□□ 0.52
CAPN1-201ENST00000279247 NT5MQ9NPB1 228 aa18.29■□□□□ 0.52
CAPN1-201ENST00000279247 IARS2Q9NSE4 1012 aaKnown RBP18.29■□□□□ 0.52
CAPN1-201ENST00000279247 ZNF180Q9UJW8 692 aa18.29■□□□□ 0.52
CAPN1-201ENST00000279247 PRRC2BQ5JSZ5 2229 aaKnown RBP18.29■□□□□ 0.52
CAPN1-201ENST00000279247 ALDOAP04075 364 aaKnown RBP18.29■□□□□ 0.52
CAPN1-201ENST00000279247 ITGA2BP08514 1039 aa18.29■□□□□ 0.52
CAPN1-201ENST00000279247 FGFR3P22607 806 aa18.29■□□□□ 0.52
CAPN1-201ENST00000279247 ETV4P43268 484 aa18.29■□□□□ 0.52
CAPN1-201ENST00000279247 DLG2Q15700 870 aa18.29■□□□□ 0.52
CAPN1-201ENST00000279247 ANKRD20A4Q4UJ75 823 aa18.29■□□□□ 0.52
CAPN1-201ENST00000279247 CHSY1Q86X52 802 aa18.29■□□□□ 0.52
CAPN1-201ENST00000279247 DNAJC5GQ8N7S2 189 aa18.29■□□□□ 0.52
CAPN1-201ENST00000279247 MYEOVQ96EZ4 313 aa18.29■□□□□ 0.52
CAPN1-201ENST00000279247 HMCESQ96FZ2 354 aa18.29■□□□□ 0.52
CAPN1-201ENST00000279247 PAWRQ96IZ0 340 aaKnown RBP18.29■□□□□ 0.52
CAPN1-201ENST00000279247 TLR6Q9Y2C9 796 aa18.29■□□□□ 0.52
CAPN1-201ENST00000279247 PAX3P23760 479 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 TYK2P29597 1187 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 SLC18A1P54219 525 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 CHI3L2Q15782 390 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 TTC31Q49AM3 519 aaPredicted RBP18.28■□□□□ 0.52
CAPN1-201ENST00000279247 ZNF449Q6P9G9 518 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 SCML4Q8N228 414 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 ZNF276Q8N554 614 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 RTL3Q8N8U3 475 aaKnown RBP18.28■□□□□ 0.52
CAPN1-201ENST00000279247 FBXO22Q8NEZ5 403 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 SSU72Q9NP77 194 aaKnown RBP18.28■□□□□ 0.52
CAPN1-201ENST00000279247 TLR8Q9NR97 1041 aaKnown RBP18.28■□□□□ 0.52
CAPN1-201ENST00000279247 PLLPQ9Y342 182 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 OR6C75A6NL08 312 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 FSBPO95073 299 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 NIPAL4Q0D2K0 466 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 GPR17Q13304 367 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 FYB2Q5VWT5 728 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 KCTD11Q693B1 232 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 FBXL22Q6P050 247 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 SLC39A5Q6ZMH5 540 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 PPP1R14CQ8TAE6 165 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 AUTS2Q8WXX7 1259 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 UNKQ9C0B0 810 aaKnown RBP18.28■□□□□ 0.52
CAPN1-201ENST00000279247 ECT2Q9H8V3 914 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.28■□□□□ 0.52
CAPN1-201ENST00000279247 STARD13Q9Y3M8 1113 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 ATXN2Q99700 1313 aaKnown RBP18.28■□□□□ 0.52
CAPN1-201ENST00000279247 CHD7Q9P2D1 2997 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 FGF10O15520 208 aaPredicted RBP18.28■□□□□ 0.52
CAPN1-201ENST00000279247 KCNA4P22459 653 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 STEAP4Q687X5 459 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 NUDCD3Q8IVD9 361 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 PSMG2Q969U7 264 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 PRDM5Q9NQX1 630 aaPredicted RBP18.28■□□□□ 0.52
CAPN1-201ENST00000279247 PRKAG3Q9UGI9 489 aa18.28■□□□□ 0.52
CAPN1-201ENST00000279247 GJB3O75712 270 aa18.27■□□□□ 0.52
CAPN1-201ENST00000279247 GSTA2P09210 222 aa18.27■□□□□ 0.52
CAPN1-201ENST00000279247 ATF6P18850 670 aa18.27■□□□□ 0.52
CAPN1-201ENST00000279247 RPL10AP62906 217 aaKnown RBP18.27■□□□□ 0.52
CAPN1-201ENST00000279247 MRPL58Q14197 206 aaKnown RBP18.27■□□□□ 0.52
CAPN1-201ENST00000279247 MYLK2Q9H1R3 596 aa18.27■□□□□ 0.52
CAPN1-201ENST00000279247 GLOD4Q9HC38 313 aa18.27■□□□□ 0.52
CAPN1-201ENST00000279247 CASS4Q9NQ75 786 aa18.27■□□□□ 0.52
CAPN1-201ENST00000279247 RAD54BQ9Y620 910 aa18.27■□□□□ 0.52
CAPN1-201ENST00000279247 IRF1P10914 325 aa18.27■□□□□ 0.51
CAPN1-201ENST00000279247 ALADP13716 330 aa18.27■□□□□ 0.51
CAPN1-201ENST00000279247 CCNCP24863 283 aa18.27■□□□□ 0.51
CAPN1-201ENST00000279247 SLC10A7Q0GE19 358 aa18.27■□□□□ 0.51
CAPN1-201ENST00000279247 CDH17Q12864 832 aa18.27■□□□□ 0.51
CAPN1-201ENST00000279247 PDE1CQ14123 709 aaPredicted RBP18.27■□□□□ 0.51
CAPN1-201ENST00000279247 N4BP2L1Q5TBK1 243 aaPredicted RBP18.27■□□□□ 0.51
CAPN1-201ENST00000279247 MANEALQ5VSG8 457 aa18.27■□□□□ 0.51
CAPN1-201ENST00000279247 NAPEPLDQ6IQ20 393 aa18.27■□□□□ 0.51
CAPN1-201ENST00000279247 KCNMB4Q86W47 210 aa18.27■□□□□ 0.51
CAPN1-201ENST00000279247 BRD8Q9H0E9 1235 aa18.27■□□□□ 0.51
CAPN1-201ENST00000279247 NOL6Q9H6R4 1146 aaKnown RBP18.27■□□□□ 0.51
CAPN1-201ENST00000279247 ELAC1Q9H777 363 aaKnown RBP18.27■□□□□ 0.51
CAPN1-201ENST00000279247 ACTR5Q9H9F9 607 aaPredicted RBP18.27■□□□□ 0.51
CAPN1-201ENST00000279247 SP110Q9HB58 689 aa18.27■□□□□ 0.51
CAPN1-201ENST00000279247 ACSS2Q9NR19 701 aa18.27■□□□□ 0.51
CAPN1-201ENST00000279247 PITPNM1O00562 1244 aa18.26■□□□□ 0.51
CAPN1-201ENST00000279247 ALDH1A2O94788 518 aa18.26■□□□□ 0.51
CAPN1-201ENST00000279247 ITGB8P26012 769 aa18.26■□□□□ 0.51
CAPN1-201ENST00000279247 SERPINB9P50453 376 aa18.26■□□□□ 0.51
CAPN1-201ENST00000279247 MARK2Q7KZI7 788 aaKnown RBP18.26■□□□□ 0.51
CAPN1-201ENST00000279247 ANKLE1Q8NAG6 615 aa18.26■□□□□ 0.51
CAPN1-201ENST00000279247 ACVR1CQ8NER5 493 aa18.26■□□□□ 0.51
CAPN1-201ENST00000279247 GRAMD1AQ96CP6 724 aa18.26■□□□□ 0.51
CAPN1-201ENST00000279247 VAT1Q99536 393 aa18.26■□□□□ 0.51
CAPN1-201ENST00000279247 CHKBQ9Y259 395 aa18.26■□□□□ 0.51
CAPN1-201ENST00000279247 STK38LQ9Y2H1 464 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms