RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 NAT9Q9BTE0 207 aa22.52■■□□□ 1.2
CCDC7-201ENST00000277657 LRRC40Q9H9A6 602 aa22.52■■□□□ 1.2
CCDC7-201ENST00000277657 GKN1Q9NS71 199 aa22.52■■□□□ 1.2
CCDC7-201ENST00000277657 SENP1Q9P0U3 644 aa22.52■■□□□ 1.2
CCDC7-201ENST00000277657 TLL1O43897 1013 aa22.51■■□□□ 1.19
CCDC7-201ENST00000277657 ADH1AP07327 375 aa22.51■■□□□ 1.19
CCDC7-201ENST00000277657 CA8P35219 290 aa22.51■■□□□ 1.19
CCDC7-201ENST00000277657 YBEYP58557 167 aaPredicted RBP22.51■■□□□ 1.19
CCDC7-201ENST00000277657 PPARDQ03181 441 aa22.51■■□□□ 1.19
CCDC7-201ENST00000277657 OLIG2Q13516 323 aa22.51■■□□□ 1.19
CCDC7-201ENST00000277657 HNRNPDQ14103 355 aaKnown RBP22.51■■□□□ 1.19
CCDC7-201ENST00000277657 PABPC1LQ4VXU2 614 aaKnown RBP22.51■■□□□ 1.19
CCDC7-201ENST00000277657 RFWD3Q6PCD5 774 aa22.51■■□□□ 1.19
CCDC7-201ENST00000277657 DENND1CQ8IV53 801 aa22.51■■□□□ 1.19
CCDC7-201ENST00000277657 OR52K1Q8NGK4 314 aa22.51■■□□□ 1.19
CCDC7-201ENST00000277657 RBM22Q9NW64 420 aaKnown RBP eCLIP22.51■■□□□ 1.19
CCDC7-201ENST00000277657 PIH1D1Q9NWS0 290 aaKnown RBP22.51■■□□□ 1.19
CCDC7-201ENST00000277657 AAR2Q9Y312 384 aaKnown RBP22.51■■□□□ 1.19
CCDC7-201ENST00000277657 TMEM120BA0PK00 339 aa22.51■■□□□ 1.19
CCDC7-201ENST00000277657 RAMP2O60895 175 aa22.51■■□□□ 1.19
CCDC7-201ENST00000277657 ALDH1A2O94788 518 aa22.51■■□□□ 1.19
CCDC7-201ENST00000277657 OLFM2O95897 454 aa22.51■■□□□ 1.19
CCDC7-201ENST00000277657 HLA-DQB2P05538 268 aa22.51■■□□□ 1.19
CCDC7-201ENST00000277657 BRAFP15056 766 aa22.51■■□□□ 1.19
CCDC7-201ENST00000277657 OR1E1P30953 314 aa22.51■■□□□ 1.19
CCDC7-201ENST00000277657 CORO1AP31146 461 aaKnown RBP22.51■■□□□ 1.19
CCDC7-201ENST00000277657 CRADDP78560 199 aa22.51■■□□□ 1.19
CCDC7-201ENST00000277657 MZB1Q8WU39 189 aa22.51■■□□□ 1.19
CCDC7-201ENST00000277657 ZFRQ96KR1 1074 aaKnown RBP22.51■■□□□ 1.19
CCDC7-201ENST00000277657 PPP1R2P1Q96PQ5 205 aa22.51■■□□□ 1.19
CCDC7-201ENST00000277657 SYBUQ9NX95 663 aa22.51■■□□□ 1.19
CCDC7-201ENST00000277657 MOCS1Q9NZB8 636 aa22.51■■□□□ 1.19
CCDC7-201ENST00000277657 CHD5Q8TDI0 1954 aa22.5■■□□□ 1.19
CCDC7-201ENST00000277657 USP12O75317 370 aa22.5■■□□□ 1.19
CCDC7-201ENST00000277657 ANXA9O76027 345 aa22.5■■□□□ 1.19
CCDC7-201ENST00000277657 PGAM1P18669 254 aa22.5■■□□□ 1.19
CCDC7-201ENST00000277657 KRT15P19012 456 aa22.5■■□□□ 1.19
CCDC7-201ENST00000277657 ERVFC1P60507 584 aa22.5■■□□□ 1.19
CCDC7-201ENST00000277657 TNK2Q07912 1038 aa22.5■■□□□ 1.19
CCDC7-201ENST00000277657 SERINC3Q13530 473 aa22.5■■□□□ 1.19
CCDC7-201ENST00000277657 POLD3Q15054 466 aaPredicted RBP22.5■■□□□ 1.19
CCDC7-201ENST00000277657 ZNF771Q7L3S4 317 aaPredicted RBP22.5■■□□□ 1.19
CCDC7-201ENST00000277657 ATXN2LQ8WWM7 1075 aaKnown RBP22.5■■□□□ 1.19
CCDC7-201ENST00000277657 TCF25Q9BQ70 676 aa22.5■■□□□ 1.19
CCDC7-201ENST00000277657 FAM159BA6NKW6 160 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 J3KR12 359 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 RENBPP51606 427 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 NAPEPLDQ6IQ20 393 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 CASC4Q6P4E1 433 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 TRMT10BQ6PF06 316 aaKnown RBP22.49■■□□□ 1.19
CCDC7-201ENST00000277657 LEKR1Q6ZMV7 388 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 CCDC149Q6ZUS6 474 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 LRRC6Q86X45 466 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 CFAP52Q8N1V2 620 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 LRRC3Q9BY71 257 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 EPN3Q9H201 632 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 SMYD2Q9NRG4 433 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 STOML2Q9UJZ1 356 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 AGO1Q9UL18 857 aaKnown RBP22.49■■□□□ 1.19
CCDC7-201ENST00000277657 CXorf49A8MYA2 514 aaPredicted RBP22.49■■□□□ 1.19
CCDC7-201ENST00000277657 H3BNC9 293 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 AP3B1O00203 1094 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 CTNNB1P35222 781 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 IL10RBQ08334 325 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 MPP2Q14168 576 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 RABGAP1LQ5R372 815 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 ADGRF1Q5T601 910 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 LINC00523Q86TU6 105 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 SLC26A11Q86WA9 606 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 TEX26Q8N6G2 289 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 SPATA22Q8NHS9 363 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 WBP2Q969T9 261 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 PRICKLE1Q96MT3 831 aaPredicted RBP22.49■■□□□ 1.19
CCDC7-201ENST00000277657 SLC22A12Q96S37 553 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 EMILIN2Q9BXX0 1053 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 TRABDQ9H4I3 376 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 ALG13Q9NP73 1137 aaKnown RBP22.49■■□□□ 1.19
CCDC7-201ENST00000277657 INTS9Q9NV88 658 aaKnown RBP22.49■■□□□ 1.19
CCDC7-201ENST00000277657 UBP1Q9NZI7 540 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 BFARQ9NZS9 450 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 ZNF180Q9UJW8 692 aa22.49■■□□□ 1.19
CCDC7-201ENST00000277657 ZFP37Q9Y6Q3 630 aaPredicted RBP22.49■■□□□ 1.19
CCDC7-201ENST00000277657 INHBAP08476 426 aa22.48■■□□□ 1.19
CCDC7-201ENST00000277657 SYN1P17600 705 aa22.48■■□□□ 1.19
CCDC7-201ENST00000277657 NPY2RP49146 381 aa22.48■■□□□ 1.19
CCDC7-201ENST00000277657 CDH4P55283 916 aa22.48■■□□□ 1.19
CCDC7-201ENST00000277657 DMTNQ08495 405 aa22.48■■□□□ 1.19
CCDC7-201ENST00000277657 TMC8Q8IU68 726 aa22.48■■□□□ 1.19
CCDC7-201ENST00000277657 MRPL43Q8N983 215 aaKnown RBP22.48■■□□□ 1.19
CCDC7-201ENST00000277657 KREMEN2Q8NCW0 462 aa22.48■■□□□ 1.19
CCDC7-201ENST00000277657 TTC17Q96AE7 1141 aa22.48■■□□□ 1.19
CCDC7-201ENST00000277657 SP110Q9HB58 689 aa22.48■■□□□ 1.19
CCDC7-201ENST00000277657 IKBKGQ9Y6K9 419 aa22.48■■□□□ 1.19
CCDC7-201ENST00000277657 DENND4CQ5VZ89 1909 aa22.48■■□□□ 1.19
CCDC7-201ENST00000277657 C2orf71A6NGG8 1288 aa22.47■■□□□ 1.19
CCDC7-201ENST00000277657 LATS1O95835 1130 aa22.47■■□□□ 1.19
CCDC7-201ENST00000277657 LRG1P02750 347 aa22.47■■□□□ 1.19
CCDC7-201ENST00000277657 C8AP07357 584 aa22.47■■□□□ 1.19
CCDC7-201ENST00000277657 MBL2P11226 248 aaPredicted RBP22.47■■□□□ 1.19
CCDC7-201ENST00000277657 GEMP55040 296 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms