RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 IZUMO2Q6UXV1 221 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 ZNF786Q8N393 782 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 DBF4BQ8NFT6 615 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 PANX3Q96QZ0 392 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 GOLPH3LQ9H4A5 285 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 ATP13A3Q9H7F0 1226 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 ATXN10Q9UBB4 475 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 PADI3Q9ULW8 664 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 MTO1Q9Y2Z2 717 aaKnown RBP7.96□□□□□ -1.14
USP3-201ENST00000268049 CPED1A4D0V7 1026 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 PSMC3P17980 439 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 TARSP26639 723 aaKnown RBP7.96□□□□□ -1.14
USP3-201ENST00000268049 ITPRIPL2Q3MIP1 535 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 ZDHHC20Q5W0Z9 365 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 NYAP1Q6ZVC0 841 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 ANKS1BQ7Z6G8 1248 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 UBE2Q1Q7Z7E8 422 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 RASGRP3Q8IV61 690 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 CYP4X1Q8N118 509 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 CCDC185Q8N715 623 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 MTERF3Q96E29 417 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 L2HGDHQ9H9P8 463 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 CLIC5Q9NZA1 410 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 CD274Q9NZQ7 290 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 SOX13Q9UN79 622 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 SH3GLB1Q9Y371 365 aa7.96□□□□□ -1.14
USP3-201ENST00000268049 NEDD8-MDP1E9PL57 170 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 EIF2S1P05198 315 aaKnown RBP7.95□□□□□ -1.14
USP3-201ENST00000268049 SERPINF2P08697 491 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 MAPK1P28482 360 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 ZNHIT3Q15649 155 aaPredicted RBP7.95□□□□□ -1.14
USP3-201ENST00000268049 FBXO43Q4G163 708 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 ZC2HC1CQ53FD0 456 aaPredicted RBP7.95□□□□□ -1.14
USP3-201ENST00000268049 C16orf89Q6UX73 402 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 DHX40Q8IX18 779 aaKnown RBP7.95□□□□□ -1.14
USP3-201ENST00000268049 CENPSQ8N2Z9 138 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 GRIN3AQ8TCU5 1115 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 EZH1Q92800 747 aaPredicted RBP7.95□□□□□ -1.14
USP3-201ENST00000268049 TADA1Q96BN2 335 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 QRFPRQ96P65 431 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 KLHL5Q96PQ7 755 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 CYLDQ9NQC7 956 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 TBC1D13Q9NVG8 400 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 NCKIPSDQ9NZQ3 722 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 TSR3Q9UJK0 312 aaKnown RBP7.95□□□□□ -1.14
USP3-201ENST00000268049 SNX12Q9UMY4 172 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 PTPRJQ12913 1337 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 C5P01031 1676 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 IGKV6D-41A0A0C4DH26 115 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 TRIM49BA6NDI0 452 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 TBL1XO60907 577 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 ZNF217O75362 1048 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 IFNA16P05015 189 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 PABPC1P11940 636 aaKnown RBP7.95□□□□□ -1.14
USP3-201ENST00000268049 CCT3P49368 545 aaKnown RBP7.95□□□□□ -1.14
USP3-201ENST00000268049 PLIN5Q00G26 463 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 DMC1Q14565 340 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 BOLA3Q53S33 107 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 PHF19Q5T6S3 580 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 VSTM1Q6UX27 236 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 RUSC1Q9BVN2 902 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 PABPC3Q9H361 631 aaKnown RBP7.95□□□□□ -1.14
USP3-201ENST00000268049 TRABDQ9H4I3 376 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 CAPN10Q9HC96 672 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 WWOXQ9NZC7 414 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 CEP72Q9P209 647 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 SNX6Q9UNH7 406 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 PCDHA2Q9Y5H9 948 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 THSD7AQ9UPZ6 1657 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 H3BQF6 201 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 KRT16P08779 473 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 FGFR4P22455 802 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 CES1P23141 567 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 OR1E1P30953 314 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 OTUD4Q01804 1114 aaKnown RBP7.95□□□□□ -1.14
USP3-201ENST00000268049 DHX34Q14147 1143 aaKnown RBP7.95□□□□□ -1.14
USP3-201ENST00000268049 PCSK7Q16549 785 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 ARMCX4Q5H9R4 360 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 TRAPPC11Q7Z392 1133 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 TCAIMQ8N3R3 496 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 LIX1Q8N485 282 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 IL22RA1Q8N6P7 574 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 SUN5Q8TC36 379 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 TM9SF4Q92544 642 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 CD101Q93033 1021 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 ZFRQ96KR1 1074 aaKnown RBP7.95□□□□□ -1.14
USP3-201ENST00000268049 FBXL18Q96ME1 805 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 IGSF9Q9P2J2 1179 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 ZNHIT2Q9UHR6 403 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 COLEC10Q9Y6Z7 277 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 PLIN4Q96Q06 1357 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 LGALS16A8MUM7 142 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 GOLGA8RI6L899 631 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 HNRNPRO43390 633 aaKnown RBP7.95□□□□□ -1.14
USP3-201ENST00000268049 KATNA1O75449 491 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 ENO2P09104 434 aaPredicted RBP7.95□□□□□ -1.14
USP3-201ENST00000268049 MAPTP10636 758 aaKnown RBP7.95□□□□□ -1.14
USP3-201ENST00000268049 NPTX2P47972 431 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 DGKGP49619 791 aa7.95□□□□□ -1.14
USP3-201ENST00000268049 CCR3P51677 355 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms