RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 PKP3Q9Y446 797 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 HDAC3O15379 428 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 SIN3BO75182 1162 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 DDNO94850 711 aaPredicted RBP11.74□□□□□ -0.53
VPS33A-201ENST00000267199 MPOP05164 745 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 MYL4P12829 197 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 ATP6V1E1P36543 226 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 MIB1Q86YT6 1006 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 CAMK1DQ8IU85 385 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 RIOX2Q8IUF8 465 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 FAM156AQ8NDB6 213 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 PLEKHO2Q8TD55 490 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 OTULINQ96BN8 352 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 ZNF395Q9H8N7 513 aaPredicted RBP11.74□□□□□ -0.53
VPS33A-201ENST00000267199 CAB39LQ9H9S4 337 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 PREBQ9HCU5 417 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 RBM22Q9NW64 420 aaKnown RBP eCLIP11.74□□□□□ -0.53
VPS33A-201ENST00000267199 TEKT2Q9UIF3 430 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 ERBB2P04626 1255 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 CD48P09326 243 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 CETPP11597 493 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 GTF2A2P52657 109 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 NRLP54845 237 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 RNASEH2BQ5TBB1 312 aaKnown RBP11.74□□□□□ -0.53
VPS33A-201ENST00000267199 ADGRD1Q6QNK2 874 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 FAM228AQ86W67 206 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 TERB1Q8NA31 727 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 CAPSLQ8WWF8 208 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 CCDC126Q96EE4 140 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 LGMNQ99538 433 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 RBBP8Q99708 897 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 ACE2Q9BYF1 805 aaPredicted RBP11.74□□□□□ -0.53
VPS33A-201ENST00000267199 POMKQ9H5K3 350 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 VTI1BQ9UEU0 232 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 ZNF180Q9UJW8 692 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 PPM1HQ9ULR3 514 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 CNTNAP2Q9UHC6 1331 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 NUP188Q5SRE5 1749 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 IQCA1LA6NCM1 817 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 NCAM2O15394 837 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 TADA2AO75478 443 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 ZNF682O95780 498 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 TSHRP16473 764 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 ADCYAP1R1P41586 468 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 CDH17Q12864 832 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 OR8H2Q8N162 312 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 GTF3C2Q8WUA4 911 aaPredicted RBP11.73□□□□□ -0.53
VPS33A-201ENST00000267199 TFAP2BQ92481 460 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 PPP1R2P1Q96PQ5 205 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 NTPCRQ9BSD7 190 aaKnown RBP11.73□□□□□ -0.53
VPS33A-201ENST00000267199 C9orf16Q9BUW7 83 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 SLC25A23Q9BV35 468 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 UBE2OQ9C0C9 1292 aaKnown RBP11.73□□□□□ -0.53
VPS33A-201ENST00000267199 PRDM12Q9H4Q4 367 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 DHX33Q9H6R0 707 aaKnown RBP11.73□□□□□ -0.53
VPS33A-201ENST00000267199 TMEM161AQ9NX61 479 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 RABGEF1Q9UJ41 708 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 RNF112Q9ULX5 631 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 MYPNQ86TC9 1320 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 ZNF142P52746 1687 aaPredicted RBP11.73□□□□□ -0.53
VPS33A-201ENST00000267199 KANSL1LA0AUZ9 987 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 ADM5C9JUS6 153 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 PEX10O60683 326 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 FBXO21O94952 628 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 CCNB1P14635 433 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 HNRNPLP14866 589 aaKnown RBP eCLIP11.73□□□□□ -0.533e-7■□□□□ 11.2
VPS33A-201ENST00000267199 VAC14Q08AM6 782 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 PPM1JQ5JR12 505 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 OLFML1Q6UWY5 402 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 NT5DC4Q86YG4 428 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 CERS2Q96G23 380 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 RPRD1AQ96P16 312 aaPredicted RBP11.73□□□□□ -0.53
VPS33A-201ENST00000267199 BDH2Q9BUT1 245 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 MID1IP1Q9NPA3 183 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 TIPRLO75663 272 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 FARP2O94887 1054 aaPredicted RBP11.73□□□□□ -0.53
VPS33A-201ENST00000267199 THP07101 528 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 FCGR1AP12314 374 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 CD151P48509 253 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 MTTPP55157 894 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 MAP3K10Q02779 954 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 RALGDSQ12967 914 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 MRPL28Q13084 256 aaKnown RBP11.73□□□□□ -0.53
VPS33A-201ENST00000267199 POLD3Q15054 466 aaPredicted RBP11.73□□□□□ -0.53
VPS33A-201ENST00000267199 NOL11Q9H8H0 719 aaKnown RBP11.73□□□□□ -0.53
VPS33A-201ENST00000267199 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.73□□□□□ -0.53
VPS33A-201ENST00000267199 SLC13A4Q9UKG4 626 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 DSEQ9UL01 958 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 PCDHGB4Q9UN71 923 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 MYH13Q9UKX3 1938 aa11.73□□□□□ -0.53
VPS33A-201ENST00000267199 ZC3H4Q9UPT8 1303 aaKnown RBP11.72□□□□□ -0.53
VPS33A-201ENST00000267199 CASTOR2A6NHX0 329 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 IRF6O14896 467 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 HS6ST1O60243 411 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 CLASP2O75122 1294 aaKnown RBP11.72□□□□□ -0.53
VPS33A-201ENST00000267199 NOMO1Q15155 1222 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 LDLRAP1Q5SW96 308 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 GLB1LQ6UWU2 654 aa11.72□□□□□ -0.53
VPS33A-201ENST00000267199 ZC3H3Q8IXZ2 948 aaKnown RBP11.72□□□□□ -0.53
VPS33A-201ENST00000267199 GLIS1Q8NBF1 620 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms