RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 LNPEPQ9UIQ6 1025 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 TNNI3P19429 210 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 SPDYCQ5MJ68 293 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 FRMD7Q6ZUT3 714 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 EHD4Q9H223 541 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 NPTXRO95502 500 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 GDI2P50395 445 aaKnown RBP11.32□□□□□ -0.6
CHFR-201ENST00000266880 CXorf57Q6NSI4 855 aaKnown RBP11.32□□□□□ -0.6
CHFR-201ENST00000266880 TMC3Q7Z5M5 1100 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 PIK3C3Q8NEB9 887 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 FBXO25Q8TCJ0 367 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 DLG3Q92796 817 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 SENP6Q9GZR1 1112 aaPredicted RBP11.32□□□□□ -0.6
CHFR-201ENST00000266880 XPR1Q9UBH6 696 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 EDARQ9UNE0 448 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 TRAPPC3O43617 180 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 ALADP13716 330 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 GARTP22102 1010 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 RPA3P35244 121 aaPredicted RBP11.32□□□□□ -0.6
CHFR-201ENST00000266880 STXBP1P61764 594 aaKnown RBP11.32□□□□□ -0.6
CHFR-201ENST00000266880 GALNTL5Q7Z4T8 443 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 CEP41Q9BYV8 373 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 SAV1Q9H4B6 383 aaPredicted RBP11.32□□□□□ -0.6
CHFR-201ENST00000266880 PCDHA10Q9Y5I2 948 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 METTL21EPA6NDL7 271 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 DYNC1LI2O43237 492 aaPredicted RBP11.32□□□□□ -0.6
CHFR-201ENST00000266880 MAP2P11137 1827 aaKnown RBP11.32□□□□□ -0.6
CHFR-201ENST00000266880 CRATP43155 626 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 GPR15P49685 360 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 SPIBQ01892 262 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 ATF7IP2Q5U623 682 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 ZNF470Q6ECI4 717 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 CLK4Q9HAZ1 481 aaKnown RBP11.32□□□□□ -0.6
CHFR-201ENST00000266880 PACSIN3Q9UKS6 424 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 AP4E1Q9UPM8 1137 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 PCDHGA10Q9Y5H3 936 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 AFF2P51816 1311 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 RPS6KA5O75582 802 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 IL27RAQ6UWB1 636 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 NEK7Q8TDX7 302 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 SLC47A1Q96FL8 570 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 ATF6P18850 670 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 OXCT1P55809 520 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 CA9Q16790 459 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 SLC20A1Q8WUM9 679 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 TRIT1Q9H3H1 467 aaKnown RBP11.32□□□□□ -0.6
CHFR-201ENST00000266880 VIRMAQ69YN4 1812 aaKnown RBP11.32□□□□□ -0.6
CHFR-201ENST00000266880 RGSL1A5PLK6 1076 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 H3BM21 787 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 M0QYT0 321 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 VCLP18206 1134 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 PPP2R2BQ00005 443 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 SV2CQ496J9 727 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 MIIPQ5JXC2 388 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 SAR1AQ9NR31 198 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 PGRMC2O15173 223 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 PGDP52209 483 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 RGS1Q08116 209 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 PNPT1Q8TCS8 783 aaKnown RBP11.32□□□□□ -0.6
CHFR-201ENST00000266880 AP1S3Q96PC3 154 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 SLC25A23Q9BV35 468 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 TMEM168Q9H0V1 697 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 CAPN6Q9Y6Q1 641 aa11.32□□□□□ -0.6
CHFR-201ENST00000266880 FAM240BA0A1B0GVZ2 78 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 SMIM22K7EJ46 135 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 RGS14O43566 566 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 NRP2O60462 931 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 TPH1P17752 444 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 GP5P40197 560 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 ELK3P41970 407 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 MAN2A2P49641 1150 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 CYP4V2Q6ZWL3 525 aaPredicted RBP11.31□□□□□ -0.6
CHFR-201ENST00000266880 IRAK3Q9Y616 596 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 ALDH3A2P51648 485 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 SQLEQ14534 574 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 NAT14Q8WUY8 206 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 DCLK3Q9C098 648 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 EME2A4GXA9 379 aaPredicted RBP11.31□□□□□ -0.6
CHFR-201ENST00000266880 ZSCAN5BA6NJL1 495 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 BIKQ13323 160 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 SPESP1Q6UW49 350 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 GCNT7Q6ZNI0 430 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 TAMM41Q96BW9 452 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 FRMD8P1Q9BZ68 369 aaPredicted RBP11.31□□□□□ -0.6
CHFR-201ENST00000266880 ASXL3Q9C0F0 2248 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 LRRC14BA6NHZ5 514 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 TULP2O00295 520 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 ITIH1P19827 911 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 GRB14Q14449 540 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 NCCRP1Q6ZVX7 275 aaPredicted RBP11.31□□□□□ -0.6
CHFR-201ENST00000266880 PHF12Q96QT6 1004 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 RGS17Q9UGC6 210 aaPredicted RBP11.31□□□□□ -0.6
CHFR-201ENST00000266880 GNPTGQ9UJJ9 305 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 USP18Q9UMW8 372 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 CCRL2O00421 344 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 SIN3BO75182 1162 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 FAM228BP0C875 321 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 TTKP33981 857 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 NT5C2P49902 561 aa11.31□□□□□ -0.6
CHFR-201ENST00000266880 IL2P60568 153 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms