RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 MATKP42679 507 aa20.19■□□□□ 0.82
CSPG5-201ENST00000264723 NR2C2P49116 596 aa20.19■□□□□ 0.82
CSPG5-201ENST00000264723 BNC2Q6ZN30 1099 aaPredicted RBP20.19■□□□□ 0.82
CSPG5-201ENST00000264723 SLC7A8Q9UHI5 535 aa20.19■□□□□ 0.82
CSPG5-201ENST00000264723 CHEK2O96017 543 aa20.19■□□□□ 0.82
CSPG5-201ENST00000264723 GM2AP17900 193 aa20.19■□□□□ 0.82
CSPG5-201ENST00000264723 HDAC4P56524 1084 aa20.19■□□□□ 0.82
CSPG5-201ENST00000264723 ASRGL1Q7L266 308 aa20.19■□□□□ 0.82
CSPG5-201ENST00000264723 CDHR5Q9HBB8 845 aa20.19■□□□□ 0.82
CSPG5-201ENST00000264723 PDP2Q9P2J9 529 aa20.19■□□□□ 0.82
CSPG5-201ENST00000264723 FKBP6O75344 327 aa20.19■□□□□ 0.82
CSPG5-201ENST00000264723 STBD1O95210 358 aa20.19■□□□□ 0.82
CSPG5-201ENST00000264723 HNRNPLP14866 589 aaKnown RBP eCLIP20.19■□□□□ 0.82
CSPG5-201ENST00000264723 RECQLP46063 649 aaPredicted RBP20.19■□□□□ 0.82
CSPG5-201ENST00000264723 LILRA4P59901 499 aa20.19■□□□□ 0.82
CSPG5-201ENST00000264723 AGKQ53H12 422 aa20.19■□□□□ 0.82
CSPG5-201ENST00000264723 TMC7Q7Z402 723 aa20.19■□□□□ 0.82
CSPG5-201ENST00000264723 SLC41A1Q8IVJ1 513 aa20.19■□□□□ 0.82
CSPG5-201ENST00000264723 MYLPFQ96A32 169 aa20.19■□□□□ 0.82
CSPG5-201ENST00000264723 COG4Q9H9E3 785 aa20.19■□□□□ 0.82
CSPG5-201ENST00000264723 SLC27A5Q9Y2P5 690 aa20.19■□□□□ 0.82
CSPG5-201ENST00000264723 PSAT1Q9Y617 370 aa20.19■□□□□ 0.82
CSPG5-201ENST00000264723 SHANK3Q9BYB0 1731 aa20.18■□□□□ 0.82
CSPG5-201ENST00000264723 COL22A1Q8NFW1 1626 aaPredicted RBP20.18■□□□□ 0.82
CSPG5-201ENST00000264723 STMN1P16949 149 aa20.18■□□□□ 0.82
CSPG5-201ENST00000264723 NFE2Q16621 373 aaPredicted RBP20.18■□□□□ 0.82
CSPG5-201ENST00000264723 ZNF618Q5T7W0 954 aa20.18■□□□□ 0.82
CSPG5-201ENST00000264723 NIPA2Q8N8Q9 360 aa20.18■□□□□ 0.82
CSPG5-201ENST00000264723 SERPINA6P08185 405 aa20.18■□□□□ 0.82
CSPG5-201ENST00000264723 MPSTP25325 297 aa20.18■□□□□ 0.82
CSPG5-201ENST00000264723 ZNF470Q6ECI4 717 aa20.18■□□□□ 0.82
CSPG5-201ENST00000264723 KYQ8NBH2 561 aa20.18■□□□□ 0.82
CSPG5-201ENST00000264723 TMEM169Q96HH4 297 aa20.18■□□□□ 0.82
CSPG5-201ENST00000264723 NDNQ99608 321 aa20.18■□□□□ 0.82
CSPG5-201ENST00000264723 SIN3BO75182 1162 aa20.18■□□□□ 0.82
CSPG5-201ENST00000264723 WFS1O76024 890 aa20.18■□□□□ 0.82
CSPG5-201ENST00000264723 C2P06681 752 aa20.18■□□□□ 0.82
CSPG5-201ENST00000264723 SP100P23497 879 aaPredicted RBP20.18■□□□□ 0.82
CSPG5-201ENST00000264723 CLCNKBP51801 687 aa20.18■□□□□ 0.82
CSPG5-201ENST00000264723 MRPS5P82675 430 aaKnown RBP20.18■□□□□ 0.82
CSPG5-201ENST00000264723 DDR2Q16832 855 aa20.18■□□□□ 0.82
CSPG5-201ENST00000264723 C16orf89Q6UX73 402 aa20.18■□□□□ 0.82
CSPG5-201ENST00000264723 NPLOC4Q8TAT6 608 aa20.18■□□□□ 0.82
CSPG5-201ENST00000264723 COLEC11Q9BWP8 271 aa20.18■□□□□ 0.82
CSPG5-201ENST00000264723 STX18Q9P2W9 335 aaKnown RBP20.18■□□□□ 0.82
CSPG5-201ENST00000264723 SMIM35A0A1B0GVV1 85 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 MYBPHLA2RUH7 354 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 TP73O15350 636 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 TIMM44O43615 452 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 DLDP09622 509 aaKnown RBP20.17■□□□□ 0.82
CSPG5-201ENST00000264723 CNTFP26441 200 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 FAM156AQ8NDB6 213 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 OLFM3Q96PB7 478 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 ECSITQ9BQ95 431 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 TBKBP1A7MCY6 615 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 SCNN1BP51168 640 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 ZNF132P52740 706 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 FAM83EQ2M2I3 478 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 RNF219Q5W0B1 726 aaPredicted RBP20.17■□□□□ 0.82
CSPG5-201ENST00000264723 LINC00523Q86TU6 105 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 FAM35AQ86V20 835 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 ATP6V0D2Q8N8Y2 350 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 PPM1HQ9ULR3 514 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 CAPN8A6NHC0 703 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 MSI1O43347 362 aaKnown RBP20.17■□□□□ 0.82
CSPG5-201ENST00000264723 KCNJ11Q14654 390 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 TBCCQ15814 346 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 CAND1Q86VP6 1230 aaKnown RBP20.17■□□□□ 0.82
CSPG5-201ENST00000264723 PQLC3Q8N755 202 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 PPP2R3CQ969Q6 453 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 AAR2Q9Y312 384 aaKnown RBP20.17■□□□□ 0.82
CSPG5-201ENST00000264723 NCF1BA6NI72 391 aaPredicted RBP20.17■□□□□ 0.82
CSPG5-201ENST00000264723 NCF1CA8MVU1 366 aaPredicted RBP20.17■□□□□ 0.82
CSPG5-201ENST00000264723 CBX4O00257 560 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 TM7SF2O76062 418 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 COX4I1P13073 169 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 NCF1P14598 390 aaPredicted RBP20.17■□□□□ 0.82
CSPG5-201ENST00000264723 CRHR1P34998 444 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 PITX1P78337 314 aaPredicted RBP20.17■□□□□ 0.82
CSPG5-201ENST00000264723 PTK2BQ14289 1009 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 ZNF460Q14592 562 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 TARBP2Q15633 366 aaKnown RBP20.17■□□□□ 0.82
CSPG5-201ENST00000264723 DUSP16Q9BY84 665 aa20.17■□□□□ 0.82
CSPG5-201ENST00000264723 LAMB1P07942 1786 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 KPNA6O60684 536 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 ALDH1A3P47895 512 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 GRIA4P48058 902 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 TBX4P57082 545 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 MARC1Q5VT66 337 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 OTOP3Q7RTS5 596 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 ZNF781Q8N8C0 355 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 RCN3Q96D15 328 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 HIC2Q96JB3 615 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 ACE2Q9BYF1 805 aaPredicted RBP20.16■□□□□ 0.82
CSPG5-201ENST00000264723 EFCAB1Q9HAE3 211 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 ARHGEF4Q9NR80 690 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 MPP6Q9NZW5 540 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 ZBTB24O43167 697 aaPredicted RBP20.16■□□□□ 0.82
CSPG5-201ENST00000264723 AMHP03971 560 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 IQCF3P0C7M6 154 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms