RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 ATP11BQ9Y2G3 1177 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 TTLL13PA6NNM8 815 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 MLNP12872 115 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 ASPAP45381 313 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 FASTKQ14296 549 aaKnown RBP16.99■□□□□ 0.31
PHRF1-201ENST00000264555 CRYMQ14894 314 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 RNASEH2BQ5TBB1 312 aaKnown RBP16.99■□□□□ 0.31
PHRF1-201ENST00000264555 MAML3Q96JK9 1138 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 ATXN2Q99700 1313 aaKnown RBP16.99■□□□□ 0.31
PHRF1-201ENST00000264555 GABRB2P47870 512 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 GRAMD4Q6IC98 578 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 SLC30A9Q6PML9 568 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 CATSPERZQ9NTU4 200 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 IL1RAPL1Q9NZN1 696 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 LTA4HP09960 611 aaKnown RBP16.99■□□□□ 0.31
PHRF1-201ENST00000264555 TUSC3Q13454 348 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 BTG3Q14201 252 aaPredicted RBP16.99■□□□□ 0.31
PHRF1-201ENST00000264555 LRRC8BQ6P9F7 803 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 SNX32Q86XE0 403 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 TTC30BQ8N4P2 665 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 SNX27Q96L92 541 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 GMLQ99445 158 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 SH3GL1Q99961 368 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 RBPJLQ9UBG7 517 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 TMEM114B3SHH9 223 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 VPS4BO75351 444 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 CCNG1P51959 295 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 QPCTQ16769 361 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 SLC10A6Q3KNW5 377 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 PRMT9Q6P2P2 845 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 HORMAD1Q86X24 394 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 NLGN2Q8NFZ4 835 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 GFM2Q969S9 779 aaKnown RBP16.99■□□□□ 0.31
PHRF1-201ENST00000264555 THAP11Q96EK4 314 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 OTUB1Q96FW1 271 aaPredicted RBP16.99■□□□□ 0.31
PHRF1-201ENST00000264555 ZNF556Q9HAH1 456 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 CROTQ9UKG9 612 aa16.99■□□□□ 0.31
PHRF1-201ENST00000264555 TREHO43280 583 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 ZBTB48P10074 688 aaPredicted RBP16.98■□□□□ 0.31
PHRF1-201ENST00000264555 SMPD1P17405 629 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 CLCN5P51795 746 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 CHRNB3Q05901 458 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 TTC33Q6PID6 262 aaPredicted RBP16.98■□□□□ 0.31
PHRF1-201ENST00000264555 PACS1Q6VY07 963 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 EIF2AQ9BY44 585 aaKnown RBP16.98■□□□□ 0.31
PHRF1-201ENST00000264555 CAAP1Q9H8G2 361 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 DNMT3LQ9UJW3 386 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 CRYL1Q9Y2S2 319 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 C15orf41Q9Y2V0 281 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 RAD51BO15315 384 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 NAGLUP54802 743 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 ACBD5Q5T8D3 534 aaPredicted RBP16.98■□□□□ 0.31
PHRF1-201ENST00000264555 SLC41A1Q8IVJ1 513 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 OR56A4Q8NGH8 313 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 TLCD1Q96CP7 247 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 ALS2Q96Q42 1657 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 NR6A1Q15406 480 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 C2CD4BA6NLJ0 364 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 PROCP04070 461 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 OTOAQ7RTW8 1153 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 STN1Q9H668 368 aaKnown RBP16.98■□□□□ 0.31
PHRF1-201ENST00000264555 NDUFA13Q9P0J0 144 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 LGALS13Q9UHV8 139 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 BAIAP3O94812 1187 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 PSMC3P17980 439 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 NOVP48745 357 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 DDX39BQ13838 428 aaKnown RBP16.98■□□□□ 0.31
PHRF1-201ENST00000264555 TCHHL1Q5QJ38 904 aaPredicted RBP16.98■□□□□ 0.31
PHRF1-201ENST00000264555 FNBP1LQ5T0N5 605 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 HECTD3Q5T447 861 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 UCMAQ8WVF2 138 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 KCTD15Q96SI1 283 aaPredicted RBP16.98■□□□□ 0.31
PHRF1-201ENST00000264555 SPASTQ9UBP0 616 aa16.98■□□□□ 0.31
PHRF1-201ENST00000264555 PLIN5Q00G26 463 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 MON1AQ86VX9 555 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 RDH11Q8TC12 318 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 ACTR8Q9H981 624 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 ME2P23368 584 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 FMO4P31512 558 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 BRCC3P46736 316 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 PLK1P53350 603 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 GBE1Q04446 702 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 SLC25A23Q9BV35 468 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 TBC1D10AQ9BXI6 508 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 ELOVL6Q9H5J4 265 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.97■□□□□ 0.31
PHRF1-201ENST00000264555 NDUFAF1Q9Y375 327 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 CD48P09326 243 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 CKBP12277 381 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 FCGR1AP12314 374 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 ATP5F1P24539 256 aaPredicted RBP16.97■□□□□ 0.31
PHRF1-201ENST00000264555 SP2Q02086 613 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 PABPC1LQ4VXU2 614 aaKnown RBP16.97■□□□□ 0.31
PHRF1-201ENST00000264555 POTEHQ6S545 545 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 STK40Q8N2I9 435 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 FCRL2Q96LA5 508 aaPredicted RBP16.97■□□□□ 0.31
PHRF1-201ENST00000264555 ACOX2Q99424 681 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 LZTS3O60299 673 aaPredicted RBP16.97■□□□□ 0.31
PHRF1-201ENST00000264555 IGSF6O95976 241 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 BCL2L1Q07817 233 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms