RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 RETREG1Q9H6L5 497 aa8.49□□□□□ -1.05
COPS4-201ENST00000264389 NOL6Q9H6R4 1146 aaKnown RBP8.49□□□□□ -1.05
COPS4-201ENST00000264389 ROPN1Q9HAT0 212 aaPredicted RBP8.49□□□□□ -1.05
COPS4-201ENST00000264389 LRRC4CQ9HCJ2 640 aa8.49□□□□□ -1.05
COPS4-201ENST00000264389 BCCIPQ9P287 314 aaKnown RBP eCLIP8.49□□□□□ -1.05
COPS4-201ENST00000264389 IPO11Q9UI26 975 aaKnown RBP8.49□□□□□ -1.05
COPS4-201ENST00000264389 AGO1Q9UL18 857 aaKnown RBP8.49□□□□□ -1.05
COPS4-201ENST00000264389 ZFP37Q9Y6Q3 630 aaPredicted RBP8.49□□□□□ -1.05
COPS4-201ENST00000264389 A0A1B0GVM2 712 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 TCAF2A6NFQ2 919 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 CCDC85CA6NKD9 419 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 ERI2A8K979 691 aaKnown RBP8.48□□□□□ -1.05
COPS4-201ENST00000264389 H3BNC9 293 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 RGS16O15492 202 aaPredicted RBP8.48□□□□□ -1.05
COPS4-201ENST00000264389 CLASP2O75122 1294 aaKnown RBP8.48□□□□□ -1.05
COPS4-201ENST00000264389 XYLBO75191 536 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 AVILO75366 819 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 RFPL2O75678 378 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 C1RP00736 705 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 KLKB1P03952 638 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 MLNP12872 115 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 EPCAMP16422 314 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 TSHRP16473 764 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 GJA1P17302 382 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 PFKLP17858 780 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 CD68P34810 354 aaPredicted RBP8.48□□□□□ -1.05
COPS4-201ENST00000264389 SLCO1A2P46721 670 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 YBEYP58557 167 aaPredicted RBP8.48□□□□□ -1.05
COPS4-201ENST00000264389 ERVK-21P61565 698 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 CAMK1Q14012 370 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 SKIDA1Q1XH10 827 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 ARHGAP15Q53QZ3 475 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 STXBP5Q5T5C0 1151 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 C6orf118Q5T5N4 469 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 CHST9Q7L1S5 443 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 CAND1Q86VP6 1230 aaKnown RBP8.48□□□□□ -1.05
COPS4-201ENST00000264389 SH2D3CQ8N5H7 860 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 SLC39A7Q92504 469 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 WBP2Q969T9 261 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 LRRC39Q96DD0 335 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 PABPC5Q96DU9 382 aaKnown RBP8.48□□□□□ -1.05
COPS4-201ENST00000264389 CFAP36Q96G28 342 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 PPP1R2P1Q96PQ5 205 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 IL12RB2Q99665 862 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 WDR83Q9BRX9 315 aaKnown RBP8.48□□□□□ -1.05
COPS4-201ENST00000264389 TMEM109Q9BVC6 243 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 STMN4Q9H169 189 aaPredicted RBP8.48□□□□□ -1.05
COPS4-201ENST00000264389 HCFC1R1Q9NWW0 138 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 ZNF212Q9UDV6 495 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 DPP7Q9UHL4 492 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 YBX2Q9Y2T7 364 aaKnown RBP8.48□□□□□ -1.05
COPS4-201ENST00000264389 SH3BP1Q9Y3L3 701 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 TEX264Q9Y6I9 313 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 MYO7AQ13402 2215 aa8.48□□□□□ -1.05
COPS4-201ENST00000264389 MYOFQ9NZM1 2061 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 TRDMT1O14717 391 aaKnown RBP8.47□□□□□ -1.05
COPS4-201ENST00000264389 PSMD3O43242 534 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 TSPAN3O60637 253 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 CLDN11O75508 207 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 SPAG6O75602 509 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 AP2A1O95782 977 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 HLA-DQB2P05538 268 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 RHOCP08134 193 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 HNRNPA1P09651 372 aaKnown RBP eCLIP8.47□□□□□ -1.05
COPS4-201ENST00000264389 PTPN2P17706 415 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 NR1D1P20393 614 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 DDX6P26196 483 aaKnown RBP eCLIP8.47□□□□□ -1.05
COPS4-201ENST00000264389 ATP5DP30049 168 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 SSTR1P30872 391 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 MAGEA3P43357 314 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 SGSHP51688 502 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 GPX6P59796 221 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 RPS24P62847 133 aaKnown RBP8.47□□□□□ -1.05
COPS4-201ENST00000264389 SLC7A9P82251 487 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 IL10RBQ08334 325 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 KLHL38Q2WGJ6 581 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 GPR158Q5T848 1215 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 PPP2R2DQ66LE6 453 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 LRRC8BQ6P9F7 803 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 LEMD2Q8NC56 503 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 HJURPQ8NCD3 748 aaPredicted RBP8.47□□□□□ -1.05
COPS4-201ENST00000264389 SHKBP1Q8TBC3 707 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 MAML1Q92585 1016 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 FATE1Q969F0 183 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 PGM2Q96G03 612 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 GORASP1Q9BQQ3 440 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 NKX2-4Q9H2Z4 354 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 LRRC40Q9H9A6 602 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 CERS4Q9HA82 394 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 RBM22Q9NW64 420 aaKnown RBP eCLIP8.47□□□□□ -1.05
COPS4-201ENST00000264389 METRNQ9UJH8 293 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 STOML2Q9UJZ1 356 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 ZNF510Q9Y2H8 683 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 BOLA1Q9Y3E2 137 aa8.47□□□□□ -1.05
COPS4-201ENST00000264389 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.46□□□□□ -1.05
COPS4-201ENST00000264389 J3KR12 359 aa8.46□□□□□ -1.05
COPS4-201ENST00000264389 SCAMP3O14828 347 aaKnown RBP8.46□□□□□ -1.05
COPS4-201ENST00000264389 TBL1XO60907 577 aa8.46□□□□□ -1.05
COPS4-201ENST00000264389 CDH16O75309 829 aa8.46□□□□□ -1.05
COPS4-201ENST00000264389 ANXA9O76027 345 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms