RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 VPS51Q9UID3 782 aa17.01■□□□□ 0.31
CHCHD3-201ENST00000262570 ARHGAP42A6NI28 874 aa17■□□□□ 0.31
CHCHD3-201ENST00000262570 CBX4O00257 560 aa17■□□□□ 0.31
CHCHD3-201ENST00000262570 KDELR3O43731 214 aa17■□□□□ 0.31
CHCHD3-201ENST00000262570 ATP1A1P05023 1023 aaKnown RBP17■□□□□ 0.31
CHCHD3-201ENST00000262570 GLDCP23378 1020 aa17■□□□□ 0.31
CHCHD3-201ENST00000262570 RPS9P46781 194 aaKnown RBP17■□□□□ 0.31
CHCHD3-201ENST00000262570 DYNLT1P63172 113 aa17■□□□□ 0.31
CHCHD3-201ENST00000262570 MRPS21P82921 87 aaKnown RBP17■□□□□ 0.31
CHCHD3-201ENST00000262570 SLC10A2Q12908 348 aaPredicted RBP17■□□□□ 0.31
CHCHD3-201ENST00000262570 C2orf27AQ580R0 203 aa17■□□□□ 0.31
CHCHD3-201ENST00000262570 EGFLAMQ63HQ2 1017 aa17■□□□□ 0.31
CHCHD3-201ENST00000262570 BBS12Q6ZW61 710 aa17■□□□□ 0.31
CHCHD3-201ENST00000262570 BMP8AQ7Z5Y6 402 aa17■□□□□ 0.31
CHCHD3-201ENST00000262570 ZNF513Q8N8E2 541 aaPredicted RBP17■□□□□ 0.31
CHCHD3-201ENST00000262570 USP33Q8TEY7 942 aa17■□□□□ 0.31
CHCHD3-201ENST00000262570 CYB5D2Q8WUJ1 264 aa17■□□□□ 0.31
CHCHD3-201ENST00000262570 DTLQ9NZJ0 730 aa17■□□□□ 0.31
CHCHD3-201ENST00000262570 PLA2G4CQ9UP65 541 aa17■□□□□ 0.31
CHCHD3-201ENST00000262570 ERVW-1Q9UQF0 538 aa17■□□□□ 0.31
CHCHD3-201ENST00000262570 CHD5Q8TDI0 1954 aa17■□□□□ 0.31
CHCHD3-201ENST00000262570 CXorf51AA0A1B0GTR3 108 aa16.99■□□□□ 0.31
CHCHD3-201ENST00000262570 DFFAO00273 331 aa16.99■□□□□ 0.31
CHCHD3-201ENST00000262570 NPC1O15118 1278 aa16.99■□□□□ 0.31
CHCHD3-201ENST00000262570 PI15O43692 258 aa16.99■□□□□ 0.31
CHCHD3-201ENST00000262570 SRPRAP08240 638 aaKnown RBP16.99■□□□□ 0.31
CHCHD3-201ENST00000262570 AOC1P19801 751 aa16.99■□□□□ 0.31
CHCHD3-201ENST00000262570 TIE1P35590 1138 aa16.99■□□□□ 0.31
CHCHD3-201ENST00000262570 ARF5P84085 180 aa16.99■□□□□ 0.31
CHCHD3-201ENST00000262570 ZNF234Q14588 700 aa16.99■□□□□ 0.31
CHCHD3-201ENST00000262570 E2F5Q15329 346 aa16.99■□□□□ 0.31
CHCHD3-201ENST00000262570 RETSATQ6NUM9 610 aa16.99■□□□□ 0.31
CHCHD3-201ENST00000262570 Q6ZS52 159 aa16.99■□□□□ 0.31
CHCHD3-201ENST00000262570 LRRC49Q8IUZ0 686 aa16.99■□□□□ 0.31
CHCHD3-201ENST00000262570 IL17RCQ8NAC3 791 aa16.99■□□□□ 0.31
CHCHD3-201ENST00000262570 PBXIP1Q96AQ6 731 aa16.99■□□□□ 0.31
CHCHD3-201ENST00000262570 MYO19Q96H55 970 aa16.99■□□□□ 0.31
CHCHD3-201ENST00000262570 RPL10LQ96L21 214 aaKnown RBP16.99■□□□□ 0.31
CHCHD3-201ENST00000262570 MRGPRX3Q96LB0 322 aa16.99■□□□□ 0.31
CHCHD3-201ENST00000262570 HPCAL4Q9UM19 191 aa16.99■□□□□ 0.31
CHCHD3-201ENST00000262570 HEY1Q9Y5J3 304 aa16.99■□□□□ 0.31
CHCHD3-201ENST00000262570 NUP205Q92621 2012 aa16.99■□□□□ 0.31
CHCHD3-201ENST00000262570 TJP3O95049 919 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 MAP3K6O95382 1288 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 DCNP07585 359 aaKnown RBP16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 TGM2P21980 687 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 CXCR5P32302 372 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 NR2C2P49116 596 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 VASPP50552 380 aaPredicted RBP16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 CLCN5P51795 746 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 GALNT2Q10471 571 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 ENPP2Q13822 863 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 GAS6Q14393 721 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 HSF5Q4G112 596 aaPredicted RBP16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 SEL1L2Q5TEA6 688 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 ARHGAP36Q6ZRI8 547 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 NYAP1Q6ZVC0 841 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 ZNF354CQ86Y25 554 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 KDM1BQ8NB78 822 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 RPLP0P6Q8NHW5 317 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 ACOX2Q99424 681 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 ZDHHC4Q9NPG8 344 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 DLGAP2Q9P1A6 1054 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 SAE1Q9UBE0 346 aaPredicted RBP16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 IPO11Q9UI26 975 aaKnown RBP16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 SLCO3A1Q9UIG8 710 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 HS3ST2Q9Y278 367 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 RAD54BQ9Y620 910 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 ZSCAN5CA6NGD5 496 aaPredicted RBP16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 J3KR12 359 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 APOC4-APOC2K7ER74 178 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 FANCGO15287 622 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 CD160O95971 181 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 MT-CO1P00395 513 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 APOC2P02655 101 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 GARSP41250 739 aaKnown RBP16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 IL12RB1P42701 662 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 STK19P49842 368 aaPredicted RBP16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 ETF1P62495 437 aaKnown RBP16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 SLC20A2Q08357 652 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 KLF1Q13351 362 aaPredicted RBP16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 PKN3Q6P5Z2 889 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 NPNTQ6UXI9 565 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 LINGO4Q6UY18 593 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 TRMT11Q7Z4G4 463 aaKnown RBP16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 CHPFQ8IZ52 775 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 CCDC33Q8N5R6 958 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 ALLCQ8N6M5 410 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 OLFM3Q96PB7 478 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 CHRDQ9H2X0 955 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 TMEM245Q9H330 911 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 PDFQ9HBH1 243 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 CACNA2D2Q9NY47 1150 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 SLC25A13Q9UJS0 675 aa16.98■□□□□ 0.31
CHCHD3-201ENST00000262570 CUL9Q8IWT3 2517 aa16.97■□□□□ 0.31
CHCHD3-201ENST00000262570 CHURC1-FNTBB4DL54 471 aa16.97■□□□□ 0.31
CHCHD3-201ENST00000262570 WASH3PC4AMC7 463 aa16.97■□□□□ 0.31
CHCHD3-201ENST00000262570 MAFKO60675 156 aa16.97■□□□□ 0.31
CHCHD3-201ENST00000262570 PRAMEF11O60813 436 aa16.97■□□□□ 0.31
CHCHD3-201ENST00000262570 PECAM1P16284 738 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms