RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 MATN2O00339 956 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 HDAC3O15379 428 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 PFDN1O60925 122 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 TMCC1O94876 653 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 C22orf31O95567 290 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 ARSAP15289 507 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 TFEBP19484 476 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 LMO2P25791 158 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 SCNN1BP51168 640 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 MPP3Q13368 585 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 PLPPR4Q7Z2D5 763 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 PCDH20Q8N6Y1 951 aaKnown RBP17.79■□□□□ 0.44
TRAM1-201ENST00000262213 KBTBD7Q8WVZ9 684 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 MRPS26Q9BYN8 205 aaKnown RBP17.79■□□□□ 0.44
TRAM1-201ENST00000262213 BFARQ9NZS9 450 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 RAB26Q9ULW5 256 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 HACD1B0YJ81 288 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 TMEM114B3SHH9 223 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 HBP1O60381 514 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 ME2P23368 584 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 FAM43BQ6ZT52 329 aaPredicted RBP17.78■□□□□ 0.44
TRAM1-201ENST00000262213 SLC26A9Q7LBE3 791 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 SULF1Q8IWU6 871 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 EXOC8Q8IYI6 725 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 CENPIQ92674 756 aaPredicted RBP17.78■□□□□ 0.44
TRAM1-201ENST00000262213 SGF29Q96ES7 293 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 OXSMQ9NWU1 459 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 FZD10Q9ULW2 581 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 TMCO1Q9UM00 188 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 MCM3APO60318 1980 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 TXNP10599 105 aaKnown RBP17.78■□□□□ 0.44
TRAM1-201ENST00000262213 PTPN1P18031 435 aaKnown RBP17.78■□□□□ 0.44
TRAM1-201ENST00000262213 PPARGP37231 505 aaPredicted RBP17.78■□□□□ 0.44
TRAM1-201ENST00000262213 RABGGTBP53611 331 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 ZNF460Q14592 562 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 GRM3Q14832 879 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 METTL21CQ5VZV1 264 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 LBX2Q6XYB7 198 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 GADL1Q6ZQY3 521 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 KCNMB4Q86W47 210 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 SNX31Q8N9S9 440 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 RP9Q8TA86 221 aaKnown RBP17.78■□□□□ 0.44
TRAM1-201ENST00000262213 KCTD4Q8WVF5 259 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 ATP6V1E2Q96A05 226 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 VPS39Q96JC1 886 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 ZMAT2Q96NC0 199 aaKnown RBP17.78■□□□□ 0.44
TRAM1-201ENST00000262213 OMDQ99983 421 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 C11orf84Q9BUA3 381 aaPredicted RBP17.78■□□□□ 0.44
TRAM1-201ENST00000262213 SPATC1LQ9H0A9 340 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 EPB41L1Q9H4G0 881 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 SMARCAD1Q9H4L7 1026 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 TLK1Q9UKI8 766 aa17.78■□□□□ 0.44
TRAM1-201ENST00000262213 HEMK1Q9Y5R4 338 aaPredicted RBP17.78■□□□□ 0.44
TRAM1-201ENST00000262213 CITO14578 2027 aa17.77■□□□□ 0.44
TRAM1-201ENST00000262213 XPO1O14980 1071 aaKnown RBP17.77■□□□□ 0.44
TRAM1-201ENST00000262213 GRID2O43424 1007 aa17.77■□□□□ 0.44
TRAM1-201ENST00000262213 RNASEH2AO75792 299 aaKnown RBP17.77■□□□□ 0.44
TRAM1-201ENST00000262213 SH3BGRP55822 239 aaPredicted RBP17.77■□□□□ 0.44
TRAM1-201ENST00000262213 ZNF618Q5T7W0 954 aa17.77■□□□□ 0.44
TRAM1-201ENST00000262213 SLC2A14Q8TDB8 520 aa17.77■□□□□ 0.44
TRAM1-201ENST00000262213 PDCD6IPQ8WUM4 868 aaKnown RBP17.77■□□□□ 0.44
TRAM1-201ENST00000262213 ABTB1Q969K4 478 aaPredicted RBP17.77■□□□□ 0.44
TRAM1-201ENST00000262213 EME1Q96AY2 570 aa17.77■□□□□ 0.44
TRAM1-201ENST00000262213 KLRG1Q96E93 195 aa17.77■□□□□ 0.44
TRAM1-201ENST00000262213 SUDS3Q9H7L9 328 aaPredicted RBP17.77■□□□□ 0.44
TRAM1-201ENST00000262213 LIN28AQ9H9Z2 209 aaKnown RBP17.77■□□□□ 0.44
TRAM1-201ENST00000262213 EIF2B3Q9NR50 452 aaKnown RBP17.77■□□□□ 0.44
TRAM1-201ENST00000262213 SNTG2Q9NY99 539 aa17.77■□□□□ 0.44
TRAM1-201ENST00000262213 CDYLQ9Y232 598 aa17.77■□□□□ 0.44
TRAM1-201ENST00000262213 RAP2CQ9Y3L5 183 aa17.77■□□□□ 0.44
TRAM1-201ENST00000262213 MPOP05164 745 aa17.77■□□□□ 0.43
TRAM1-201ENST00000262213 SNX16P57768 344 aa17.77■□□□□ 0.43
TRAM1-201ENST00000262213 RPL26P61254 145 aaKnown RBP17.77■□□□□ 0.43
TRAM1-201ENST00000262213 COG7P83436 770 aa17.77■□□□□ 0.43
TRAM1-201ENST00000262213 TMEM62Q0P6H9 643 aa17.77■□□□□ 0.43
TRAM1-201ENST00000262213 IL23RQ5VWK5 629 aa17.77■□□□□ 0.43
TRAM1-201ENST00000262213 FAM219BQ5XKK7 198 aa17.77■□□□□ 0.43
TRAM1-201ENST00000262213 GK5Q6ZS86 529 aa17.77■□□□□ 0.43
TRAM1-201ENST00000262213 PCDHAC1Q9H158 963 aa17.77■□□□□ 0.43
TRAM1-201ENST00000262213 RUVBL2Q9Y230 463 aaKnown RBP17.77■□□□□ 0.43
TRAM1-201ENST00000262213 NUP205Q92621 2012 aa17.77■□□□□ 0.43
TRAM1-201ENST00000262213 ZCWPW2A0A1B0GU75 182 aa17.76■□□□□ 0.43
TRAM1-201ENST00000262213 ZNF487B1APH4 448 aa17.76■□□□□ 0.43
TRAM1-201ENST00000262213 TOMM70O94826 608 aa17.76■□□□□ 0.43
TRAM1-201ENST00000262213 VAPBO95292 243 aa17.76■□□□□ 0.43
TRAM1-201ENST00000262213 SETSIPP0DME0 302 aa17.76■□□□□ 0.43
TRAM1-201ENST00000262213 ADIGQ0VDE8 80 aa17.76■□□□□ 0.43
TRAM1-201ENST00000262213 BST2Q10589 180 aaKnown RBP17.76■□□□□ 0.43
TRAM1-201ENST00000262213 PPP1R13LQ8WUF5 828 aa17.76■□□□□ 0.43
TRAM1-201ENST00000262213 ZFRQ96KR1 1074 aaKnown RBP17.76■□□□□ 0.43
TRAM1-201ENST00000262213 TSNARE1Q96NA8 513 aa17.76■□□□□ 0.43
TRAM1-201ENST00000262213 APBA2Q99767 749 aa17.76■□□□□ 0.43
TRAM1-201ENST00000262213 SENP6Q9GZR1 1112 aaPredicted RBP17.76■□□□□ 0.43
TRAM1-201ENST00000262213 ADAM28Q9UKQ2 775 aa17.76■□□□□ 0.43
TRAM1-201ENST00000262213 EEF2KO00418 725 aaKnown RBP17.76■□□□□ 0.43
TRAM1-201ENST00000262213 ZBTB24O43167 697 aaPredicted RBP17.76■□□□□ 0.43
TRAM1-201ENST00000262213 USP10Q14694 798 aaKnown RBP17.76■□□□□ 0.43
TRAM1-201ENST00000262213 CLEC14AQ86T13 490 aa17.76■□□□□ 0.43
TRAM1-201ENST00000262213 RIOX2Q8IUF8 465 aa17.76■□□□□ 0.43
TRAM1-201ENST00000262213 AHI1Q8N157 1196 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms