RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 CD70P32970 193 aa28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 COILP38432 576 aaPredicted RBP28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 MAPKAPK2P49137 400 aa28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 BYSLQ13895 437 aaKnown RBP28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 CRYMQ14894 314 aa28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 POLD3Q15054 466 aaPredicted RBP28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 CYP1B1Q16678 543 aa28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 TTC13Q8NBP0 860 aa28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 ATP2A3Q93084 1043 aa28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 AMACRQ9UHK6 382 aa28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 TBC1D30Q9Y2I9 924 aa28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 ACTL7AQ9Y615 435 aa28.13■■■□□ 2.09
SMARCD3-201ENST00000262188 VAV1P15498 845 aa28.12■■■□□ 2.09
SMARCD3-201ENST00000262188 CSKP41240 450 aa28.12■■■□□ 2.09
SMARCD3-201ENST00000262188 NR2C2P49116 596 aa28.12■■■□□ 2.09
SMARCD3-201ENST00000262188 GDF10P55107 478 aa28.12■■■□□ 2.09
SMARCD3-201ENST00000262188 MESP2Q0VG99 397 aa28.12■■■□□ 2.09
SMARCD3-201ENST00000262188 GALNT2Q10471 571 aa28.12■■■□□ 2.09
SMARCD3-201ENST00000262188 GAB4Q2WGN9 574 aa28.12■■■□□ 2.09
SMARCD3-201ENST00000262188 CCDC137Q6PK04 289 aaKnown RBP28.12■■■□□ 2.09
SMARCD3-201ENST00000262188 CEP41Q9BYV8 373 aa28.12■■■□□ 2.09
SMARCD3-201ENST00000262188 SHROOM3Q8TF72 1996 aa28.12■■■□□ 2.09
SMARCD3-201ENST00000262188 COL4A3Q01955 1670 aa28.12■■■□□ 2.09
SMARCD3-201ENST00000262188 GNA12Q03113 381 aa28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 AP1B1Q10567 949 aa28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 LMAN2Q12907 356 aa28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 OASLQ15646 514 aaKnown RBP28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 DARS2Q6PI48 645 aaKnown RBP28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 FOXR1Q6PIV2 292 aa28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 CCDC114Q96M63 670 aa28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 SPON2Q9BUD6 331 aa28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 RAB21Q9UL25 225 aa28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 ZNF148Q9UQR1 794 aa28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 MYO10Q9HD67 2058 aa28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 NFATC1O95644 943 aa28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 RBL1P28749 1068 aa28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 HLA-FP30511 346 aa28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 GARSP41250 739 aaKnown RBP28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 SOX9P48436 509 aa28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 PDGFRLQ15198 375 aa28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 MPP7Q5T2T1 576 aa28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 APCDD1Q8J025 514 aa28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 C12orf50Q8NA57 414 aaPredicted RBP28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 GLIS1Q8NBF1 620 aa28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 ARHGEF2Q92974 986 aaKnown RBP28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 MUC3BQ9H195 1237 aa28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 ABCB8Q9NUT2 735 aa28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 MARK1Q9P0L2 795 aa28.11■■■□□ 2.09
SMARCD3-201ENST00000262188 J3KR12 359 aa28.1■■■□□ 2.09
SMARCD3-201ENST00000262188 ARNTLO00327 626 aa28.1■■■□□ 2.09
SMARCD3-201ENST00000262188 ETS1P14921 441 aa28.1■■■□□ 2.09
SMARCD3-201ENST00000262188 SLC6A11P48066 632 aa28.1■■■□□ 2.09
SMARCD3-201ENST00000262188 NDST2P52849 883 aa28.1■■■□□ 2.09
SMARCD3-201ENST00000262188 RUNX3Q13761 415 aa28.1■■■□□ 2.09
SMARCD3-201ENST00000262188 C6orf118Q5T5N4 469 aa28.1■■■□□ 2.09
SMARCD3-201ENST00000262188 RNF43Q68DV7 783 aa28.1■■■□□ 2.09
SMARCD3-201ENST00000262188 LZTR1Q8N653 840 aa28.1■■■□□ 2.09
SMARCD3-201ENST00000262188 BRD9Q9H8M2 597 aa28.1■■■□□ 2.09
SMARCD3-201ENST00000262188 PRDM16Q9HAZ2 1276 aa28.1■■■□□ 2.09
SMARCD3-201ENST00000262188 MCM8Q9UJA3 840 aa28.1■■■□□ 2.09
SMARCD3-201ENST00000262188 CHADO15335 359 aa28.1■■■□□ 2.09
SMARCD3-201ENST00000262188 ADH1CP00326 375 aa28.1■■■□□ 2.09
SMARCD3-201ENST00000262188 BIRC2Q13490 618 aa28.1■■■□□ 2.09
SMARCD3-201ENST00000262188 CCDC105Q8IYK2 499 aa28.1■■■□□ 2.09
SMARCD3-201ENST00000262188 CHFRQ96EP1 664 aa28.1■■■□□ 2.09
SMARCD3-201ENST00000262188 CCDC188H7C350 402 aa28.09■■■□□ 2.09
SMARCD3-201ENST00000262188 KCNK1O00180 336 aa28.09■■■□□ 2.09
SMARCD3-201ENST00000262188 TRIP13Q15645 432 aaPredicted RBP28.09■■■□□ 2.09
SMARCD3-201ENST00000262188 IL31Q6EBC2 164 aa28.09■■■□□ 2.09
SMARCD3-201ENST00000262188 SETD3Q86TU7 594 aaPredicted RBP28.09■■■□□ 2.09
SMARCD3-201ENST00000262188 SLC44A3Q8N4M1 653 aa28.09■■■□□ 2.09
SMARCD3-201ENST00000262188 ATPAF2Q8N5M1 289 aa28.09■■■□□ 2.09
SMARCD3-201ENST00000262188 FAM71DQ8N9W8 422 aa28.09■■■□□ 2.09
SMARCD3-201ENST00000262188 NKD2Q969F2 451 aaPredicted RBP28.09■■■□□ 2.09
SMARCD3-201ENST00000262188 QKIQ96PU8 341 aaKnown RBP eCLIP28.09■■■□□ 2.09
SMARCD3-201ENST00000262188 SEPT10Q9P0V9 454 aa28.09■■■□□ 2.09
SMARCD3-201ENST00000262188 INTS6Q9UL03 887 aaKnown RBP28.09■■■□□ 2.09
SMARCD3-201ENST00000262188 VCANP13611 3396 aa28.08■■■□□ 2.09
SMARCD3-201ENST00000262188 NARSO43776 548 aaKnown RBP28.08■■■□□ 2.09
SMARCD3-201ENST00000262188 SNAP91O60641 907 aa28.08■■■□□ 2.09
SMARCD3-201ENST00000262188 MAFKO60675 156 aa28.08■■■□□ 2.09
SMARCD3-201ENST00000262188 GAD2Q05329 585 aa28.08■■■□□ 2.09
SMARCD3-201ENST00000262188 PDK1Q15118 436 aa28.08■■■□□ 2.09
SMARCD3-201ENST00000262188 KIAA1958Q8N8K9 716 aa28.08■■■□□ 2.09
SMARCD3-201ENST00000262188 FIBINQ8TAL6 211 aa28.08■■■□□ 2.09
SMARCD3-201ENST00000262188 TFB1MQ8WVM0 346 aaKnown RBP28.08■■■□□ 2.09
SMARCD3-201ENST00000262188 LMLNQ96KR4 655 aa28.08■■■□□ 2.09
SMARCD3-201ENST00000262188 FEM1AQ9BSK4 669 aa28.08■■■□□ 2.09
SMARCD3-201ENST00000262188 DNAJC17Q9NVM6 304 aaKnown RBP28.08■■■□□ 2.09
SMARCD3-201ENST00000262188 ILVBLA1L0T0 632 aa28.08■■■□□ 2.09
SMARCD3-201ENST00000262188 ZSCAN5DPP0CG00 497 aa28.08■■■□□ 2.09
SMARCD3-201ENST00000262188 CHRNA3P32297 505 aa28.08■■■□□ 2.09
SMARCD3-201ENST00000262188 SERINC3Q13530 473 aa28.08■■■□□ 2.09
SMARCD3-201ENST00000262188 SLC45A4Q5BKX6 768 aa28.08■■■□□ 2.09
SMARCD3-201ENST00000262188 BEND6Q5SZJ8 279 aaPredicted RBP28.08■■■□□ 2.09
SMARCD3-201ENST00000262188 ALG14Q96F25 216 aa28.08■■■□□ 2.09
SMARCD3-201ENST00000262188 CABS1Q96KC9 395 aa28.08■■■□□ 2.09
SMARCD3-201ENST00000262188 LRRC1Q9BTT6 524 aa28.08■■■□□ 2.09
SMARCD3-201ENST00000262188 ATP13A1Q9HD20 1204 aa28.08■■■□□ 2.09
SMARCD3-201ENST00000262188 IPO11Q9UI26 975 aaKnown RBP28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms